Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS11790

Experiment: RCH2_defined_noCarbon with Mixed culture; Burkholderia bryophila 376MFSha3.1 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS11780 and BWI76_RS11785 are separated by 130 nucleotidesBWI76_RS11785 and BWI76_RS11790 are separated by 32 nucleotidesBWI76_RS11790 and BWI76_RS11795 are separated by 99 nucleotides BWI76_RS11780: BWI76_RS11780 - 2-deoxyglucose-6-phosphatase, at 2,478,445 to 2,479,113 _RS11780 BWI76_RS11785: BWI76_RS11785 - hypothetical protein, at 2,479,244 to 2,479,780 _RS11785 BWI76_RS11790: BWI76_RS11790 - acyl-CoA thioesterase, at 2,479,813 to 2,480,211 _RS11790 BWI76_RS11795: BWI76_RS11795 - TonB-dependent siderophore receptor, at 2,480,311 to 2,482,491 _RS11795 Position (kb) 2479 2480 2481Strain fitness (log2 ratio) -1 0 1at 2478.926 kb on + strand, within BWI76_RS11780at 2479.249 kb on - strandat 2479.249 kb on - strandat 2479.401 kb on + strand, within BWI76_RS11785at 2480.138 kb on + strand, within BWI76_RS11790at 2480.574 kb on - strand, within BWI76_RS11795at 2480.610 kb on + strand, within BWI76_RS11795at 2480.618 kb on - strand, within BWI76_RS11795at 2481.066 kb on - strand, within BWI76_RS11795at 2481.106 kb on + strand, within BWI76_RS11795at 2481.114 kb on - strand, within BWI76_RS11795

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Per-strain Table

Position Strand Gene LocusTag Fraction RCH2_defined_noCarbon with Mixed culture; Burkholderia bryophila 376MFSha3.1 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x
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2,478,926 + BWI76_RS11780 0.72 -0.4
2,479,249 - +0.9
2,479,249 - -0.3
2,479,401 + BWI76_RS11785 0.29 +0.9
2,480,138 + BWI76_RS11790 0.81 +0.7
2,480,574 - BWI76_RS11795 0.12 +0.7
2,480,610 + BWI76_RS11795 0.14 +0.2
2,480,618 - BWI76_RS11795 0.14 +0.9
2,481,066 - BWI76_RS11795 0.35 +0.7
2,481,106 + BWI76_RS11795 0.36 +0.4
2,481,114 - BWI76_RS11795 0.37 -0.4

Or see this region's nucleotide sequence