Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS10990

Experiment: RCH2_defined_noCarbon with Mixed culture; Burkholderia bryophila 376MFSha3.1 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_noCarbon with Mixed culture; Burkholderia bryophila 376MFSha3.1 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x
2,317,337	-				-0.3
2,317,344	+				-0.6
2,317,352	+				+0.6
2,317,361	-				+2.3
2,317,367	-				+1.2
2,317,433	-				+0.2
2,317,492	-				+0.5
2,317,497	-				+0.2
2,317,517	-		BWI76_RS10980	0.18	-0.0
2,317,518	-		BWI76_RS10980	0.18	+0.3
2,317,638	+		BWI76_RS10980	0.65	+0.7
2,317,643	+		BWI76_RS10980	0.67	-0.3
2,317,670	+		BWI76_RS10980	0.78	-0.6
2,317,676	-		BWI76_RS10980	0.80	+1.3
2,317,680	+		BWI76_RS10980	0.82	+0.1
2,317,690	+		BWI76_RS10980	0.85	+0.2
2,317,697	+		BWI76_RS10980	0.88	-2.4
2,317,697	+		BWI76_RS10980	0.88	+0.6
2,317,698	-		BWI76_RS10980	0.89	+0.1
2,317,705	-				-0.2
2,317,705	-				-0.5
2,317,726	+				+0.8
2,317,927	+				-2.1
2,317,935	-				-0.4
2,317,945	-				+0.2
2,318,025	+				-1.5
2,318,033	-				-0.8
2,318,033	-				-0.3
2,318,035	-				+0.5
2,318,045	-		BWI76_RS10985	0.13	-0.4
2,318,134	+		BWI76_RS10985	0.50	-0.7
2,318,152	-		BWI76_RS10985	0.57	+0.1
2,318,193	-		BWI76_RS10985	0.74	+0.7
2,318,193	-		BWI76_RS10985	0.74	-0.0
2,318,439	+		BWI76_RS10990	0.10	-1.9
2,318,567	+				+1.7
2,318,866	-		BWI76_RS10990	0.51	-3.0
2,319,099	-		BWI76_RS10990	0.73	+1.7
2,319,372	+				-4.3
2,319,431	+				-0.3
2,319,761	+		BWI76_RS10995	0.47	+0.4
2,319,769	-		BWI76_RS10995	0.48	+2.9
2,319,838	-		BWI76_RS10995	0.60	+0.0
2,319,947	-		BWI76_RS10995	0.80	+0.2
2,319,989	+		BWI76_RS10995	0.87	-0.0
2,320,007	+				-1.9
2,320,007	-				+1.5
2,320,020	-				-0.2
2,320,176	+				-0.1
2,320,363	-				-0.3
2,320,363	-		BWI76_RS11000	0.26	+0.7