Experiment: MoYLS4 with Chlorite 100uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU2869 and DVU2870 are separated by 11 nucleotides DVU2870 and DVU2871 are separated by 9 nucleotides DVU2871 and DVU2872 overlap by 17 nucleotides
DVU2869: DVU2869 - major head protein (TIGR), at 2,963,910 to 2,964,914
DVU2869
DVU2870: DVU2870 - conserved hypothetical protein (TIGR), at 2,964,926 to 2,965,309
DVU2870
DVU2871: DVU2871 - minor capsid protein C (TIGR), at 2,965,319 to 2,966,638
DVU2871
DVU2872: DVU2872 - phage portal protein, lambda family (TIGR), at 2,966,622 to 2,968,322
DVU2872
Position (kb)
2965
2966
2967 Strain fitness (log2 ratio)
-1
0
1
2 at 2964.385 kb on + strand, within DVU2869 at 2965.486 kb on - strand, within DVU2871 at 2965.493 kb on - strand, within DVU2871 at 2965.826 kb on + strand, within DVU2871 at 2966.004 kb on + strand, within DVU2871 at 2966.165 kb on + strand, within DVU2871 at 2966.198 kb on - strand, within DVU2871 at 2966.198 kb on - strand, within DVU2871 at 2966.198 kb on - strand, within DVU2871 at 2966.198 kb on - strand, within DVU2871 at 2966.517 kb on + strand at 2966.526 kb on + strand at 2966.542 kb on - strand at 2966.950 kb on + strand, within DVU2872 at 2967.007 kb on - strand, within DVU2872 at 2967.477 kb on - strand, within DVU2872 at 2967.505 kb on - strand, within DVU2872 at 2967.516 kb on - strand, within DVU2872 at 2967.547 kb on - strand, within DVU2872 at 2967.567 kb on - strand, within DVU2872
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Chlorite 100uM remove 2,964,385 + DVU2869 0.47 +1.5 2,965,486 - DVU2871 0.13 +0.7 2,965,493 - DVU2871 0.13 -0.6 2,965,826 + DVU2871 0.38 +0.6 2,966,004 + DVU2871 0.52 -0.3 2,966,165 + DVU2871 0.64 +0.1 2,966,198 - DVU2871 0.67 +0.5 2,966,198 - DVU2871 0.67 +0.3 2,966,198 - DVU2871 0.67 +0.3 2,966,198 - DVU2871 0.67 +0.1 2,966,517 + -0.3 2,966,526 + -1.6 2,966,542 - +0.3 2,966,950 + DVU2872 0.19 +0.3 2,967,007 - DVU2872 0.23 +1.8 2,967,477 - DVU2872 0.50 +0.2 2,967,505 - DVU2872 0.52 +0.2 2,967,516 - DVU2872 0.53 +0.0 2,967,547 - DVU2872 0.54 -0.1 2,967,567 - DVU2872 0.56 +0.3
Or see this region's nucleotide sequence