Experiment: MoYLS4 with Chlorite 100uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt stfE and DVU2850 overlap by 8 nucleotides DVU2850 and DVU2851 are separated by 8 nucleotides DVU2851 and DVU2852 are separated by 8 nucleotides DVU2852 and DVU2853 are separated by 1 nucleotides
DVU2849: stfE - tail fiber protein, putative (TIGR), at 2,950,331 to 2,951,146
stfE
DVU2850: DVU2850 - tail protein, putative (TIGR), at 2,951,139 to 2,951,765
DVU2850
DVU2851: DVU2851 - tail protein, putative (TIGR), at 2,951,774 to 2,952,835
DVU2851
DVU2852: DVU2852 - tail protein, putative (TIGR), at 2,952,844 to 2,953,320
DVU2852
DVU2853: DVU2853 - phage baseplate assembly protein V, putative (TIGR), at 2,953,322 to 2,953,960
DVU2853
Position (kb)
2951
2952
2953 Strain fitness (log2 ratio)
-2
-1
0
1 at 2951.019 kb on + strand, within stfE at 2951.034 kb on - strand, within stfE at 2951.040 kb on + strand, within stfE at 2951.416 kb on + strand, within DVU2850 at 2951.443 kb on + strand, within DVU2850 at 2951.472 kb on + strand, within DVU2850 at 2951.652 kb on - strand, within DVU2850 at 2951.779 kb on - strand at 2951.779 kb on - strand at 2951.846 kb on + strand at 2952.191 kb on - strand, within DVU2851 at 2952.191 kb on - strand, within DVU2851 at 2952.359 kb on + strand, within DVU2851 at 2952.540 kb on + strand, within DVU2851 at 2952.540 kb on + strand, within DVU2851 at 2952.543 kb on - strand, within DVU2851 at 2952.543 kb on - strand, within DVU2851 at 2952.548 kb on - strand, within DVU2851 at 2952.603 kb on + strand, within DVU2851 at 2952.900 kb on + strand, within DVU2852 at 2952.972 kb on + strand, within DVU2852 at 2952.972 kb on + strand, within DVU2852 at 2952.980 kb on - strand, within DVU2852 at 2953.222 kb on + strand, within DVU2852 at 2953.270 kb on - strand, within DVU2852 at 2953.499 kb on - strand, within DVU2853 at 2953.505 kb on + strand, within DVU2853 at 2953.646 kb on + strand, within DVU2853 at 2953.655 kb on - strand, within DVU2853 at 2953.655 kb on - strand, within DVU2853
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Chlorite 100uM remove 2,951,019 + stfE DVU2849 0.84 -0.4 2,951,034 - stfE DVU2849 0.86 -0.5 2,951,040 + stfE DVU2849 0.87 -0.7 2,951,416 + DVU2850 0.44 +1.3 2,951,443 + DVU2850 0.48 -1.1 2,951,472 + DVU2850 0.53 +1.3 2,951,652 - DVU2850 0.82 -0.0 2,951,779 - -0.1 2,951,779 - -0.4 2,951,846 + +1.4 2,952,191 - DVU2851 0.39 +0.8 2,952,191 - DVU2851 0.39 +0.4 2,952,359 + DVU2851 0.55 -0.0 2,952,540 + DVU2851 0.72 -0.5 2,952,540 + DVU2851 0.72 -0.2 2,952,543 - DVU2851 0.72 -0.2 2,952,543 - DVU2851 0.72 +0.1 2,952,548 - DVU2851 0.73 +0.3 2,952,603 + DVU2851 0.78 +0.6 2,952,900 + DVU2852 0.12 +0.0 2,952,972 + DVU2852 0.27 -0.6 2,952,972 + DVU2852 0.27 +1.3 2,952,980 - DVU2852 0.29 +0.3 2,953,222 + DVU2852 0.79 -0.7 2,953,270 - DVU2852 0.89 -0.5 2,953,499 - DVU2853 0.28 -0.2 2,953,505 + DVU2853 0.29 -0.3 2,953,646 + DVU2853 0.51 -0.3 2,953,655 - DVU2853 0.52 -2.1 2,953,655 - DVU2853 0.52 -0.2
Or see this region's nucleotide sequence