Experiment: RCH2_defined_noCarbon with Mixed culture; Dyella japonica UNC79MFTsu3.2 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS26430 and BWI76_RS26435 are separated by 166 nucleotides BWI76_RS26435 and BWI76_RS26440 are separated by 73 nucleotides BWI76_RS26440 and BWI76_RS26445 are separated by 0 nucleotides
BWI76_RS26430: BWI76_RS26430 - sulfurtransferase TusA, at 5,471,248 to 5,471,493
_RS26430
BWI76_RS26435: BWI76_RS26435 - hypothetical protein, at 5,471,660 to 5,472,325
_RS26435
BWI76_RS26440: BWI76_RS26440 - hypothetical protein, at 5,472,399 to 5,472,956
_RS26440
BWI76_RS26445: BWI76_RS26445 - MFS transporter, at 5,472,957 to 5,474,177
_RS26445
Position (kb) 5472
5473 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 5471.530 kb on - strand at 5471.561 kb on - strand at 5471.620 kb on - strand at 5471.706 kb on - strand at 5471.889 kb on + strand, within BWI76_RS26435 at 5471.889 kb on + strand, within BWI76_RS26435 at 5471.907 kb on - strand, within BWI76_RS26435 at 5471.926 kb on + strand, within BWI76_RS26435 at 5472.117 kb on + strand, within BWI76_RS26435 at 5472.200 kb on + strand, within BWI76_RS26435 at 5472.320 kb on + strand at 5472.320 kb on + strand at 5472.320 kb on + strand at 5472.328 kb on - strand at 5472.617 kb on + strand, within BWI76_RS26440 at 5472.957 kb on + strand at 5472.957 kb on + strand at 5473.226 kb on + strand, within BWI76_RS26445 at 5473.395 kb on + strand, within BWI76_RS26445 at 5473.403 kb on - strand, within BWI76_RS26445 at 5473.418 kb on - strand, within BWI76_RS26445 at 5473.463 kb on - strand, within BWI76_RS26445 at 5473.524 kb on + strand, within BWI76_RS26445 at 5473.524 kb on + strand, within BWI76_RS26445 at 5473.532 kb on - strand, within BWI76_RS26445 at 5473.532 kb on - strand, within BWI76_RS26445 at 5473.688 kb on - strand, within BWI76_RS26445 at 5473.769 kb on + strand, within BWI76_RS26445 at 5473.791 kb on + strand, within BWI76_RS26445 at 5473.822 kb on + strand, within BWI76_RS26445
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_noCarbon with Mixed culture; Dyella japonica UNC79MFTsu3.2 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x remove 5,471,530 - -0.0 5,471,561 - -1.1 5,471,620 - -0.2 5,471,706 - -0.4 5,471,889 + BWI76_RS26435 0.34 +1.9 5,471,889 + BWI76_RS26435 0.34 +0.1 5,471,907 - BWI76_RS26435 0.37 +0.1 5,471,926 + BWI76_RS26435 0.40 -0.5 5,472,117 + BWI76_RS26435 0.69 +0.5 5,472,200 + BWI76_RS26435 0.81 +0.3 5,472,320 + -0.6 5,472,320 + +0.3 5,472,320 + +3.7 5,472,328 - -0.1 5,472,617 + BWI76_RS26440 0.39 -1.1 5,472,957 + +0.1 5,472,957 + +0.7 5,473,226 + BWI76_RS26445 0.22 -0.1 5,473,395 + BWI76_RS26445 0.36 -2.0 5,473,403 - BWI76_RS26445 0.37 +0.1 5,473,418 - BWI76_RS26445 0.38 +0.8 5,473,463 - BWI76_RS26445 0.41 -0.6 5,473,524 + BWI76_RS26445 0.46 +1.0 5,473,524 + BWI76_RS26445 0.46 -0.4 5,473,532 - BWI76_RS26445 0.47 +0.7 5,473,532 - BWI76_RS26445 0.47 -2.7 5,473,688 - BWI76_RS26445 0.60 -0.4 5,473,769 + BWI76_RS26445 0.67 -0.9 5,473,791 + BWI76_RS26445 0.68 +1.1 5,473,822 + BWI76_RS26445 0.71 +0.7
Or see this region's nucleotide sequence