Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS21630

Experiment: RCH2_defined_noCarbon with Mixed culture; Dyella japonica UNC79MFTsu3.2 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_noCarbon with Mixed culture; Dyella japonica UNC79MFTsu3.2 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x
4,527,591	-		BWI76_RS21620	0.63	-0.2
4,527,674	+		BWI76_RS21620	0.73	+0.2
4,527,704	-		BWI76_RS21620	0.77	+1.3
4,527,782	+		BWI76_RS21620	0.88	-0.6
4,527,782	+				+1.5
4,527,790	-		BWI76_RS21620	0.89	-2.2
4,527,947	+				+0.6
4,527,947	+				-0.0
4,527,947	+				-1.3
4,527,947	+				-3.8
4,527,947	+				-0.6
4,527,947	+				-1.8
4,527,947	+				-2.5
4,527,947	+				-0.8
4,527,950	-				-0.0
4,527,950	-				+0.4
4,527,955	-				-1.6
4,527,958	+				-1.3
4,527,961	-				-1.3
4,528,106	+				+0.7
4,528,106	+				-0.4
4,528,106	+				+1.0
4,528,106	+				-0.6
4,528,106	+				-0.2
4,528,108	+				+0.3
4,528,114	-				+1.2
4,528,114	-				-0.0
4,528,158	+				-0.5
4,528,161	-				+1.7
4,528,164	+				+1.0
4,528,164	+				+0.9
4,528,164	+				+2.3
4,528,164	+				-0.4
4,528,166	-				-0.0
4,528,171	-				-0.4
4,528,172	-				-0.0
4,528,186	+		BWI76_RS21625	0.16	+0.3
4,528,270	+		BWI76_RS21625	0.56	-1.4
4,528,270	+		BWI76_RS21625	0.56	-0.3
4,528,270	+		BWI76_RS21625	0.56	+0.2
4,528,270	+		BWI76_RS21625	0.56	-0.9
4,528,278	-		BWI76_RS21625	0.60	-0.9
4,528,278	-		BWI76_RS21625	0.60	-0.0
4,528,278	-		BWI76_RS21625	0.60	-0.4
4,528,285	+		BWI76_RS21625	0.63	-3.1
4,528,289	+		BWI76_RS21625	0.65	-0.0
4,528,293	-		BWI76_RS21625	0.67	-1.7
4,528,293	-		BWI76_RS21625	0.67	+0.4
4,528,293	-		BWI76_RS21625	0.67	-1.6
4,528,296	-		BWI76_RS21625	0.69	-1.2
4,528,298	-		BWI76_RS21625	0.70	-1.0
4,528,298	-		BWI76_RS21625	0.70	-0.6
4,528,298	-		BWI76_RS21625	0.70	+0.1
4,528,298	-		BWI76_RS21625	0.70	-1.2
4,528,298	-		BWI76_RS21625	0.70	+1.0
4,528,309	+		BWI76_RS21625	0.75	-1.5
4,528,310	+		BWI76_RS21625	0.75	-1.0
4,528,315	+		BWI76_RS21625	0.78	-3.3
4,528,315	+		BWI76_RS21625	0.78	-0.0
4,528,315	+		BWI76_RS21625	0.78	-0.8
4,528,315	+		BWI76_RS21625	0.78	-1.5
4,528,315	+		BWI76_RS21625	0.78	+0.2
4,528,317	-		BWI76_RS21625	0.79	-0.3
4,528,317	-		BWI76_RS21625	0.79	-1.1
4,528,318	-		BWI76_RS21625	0.79	-0.4
4,528,318	-		BWI76_RS21625	0.79	+0.9
4,528,318	-		BWI76_RS21625	0.79	-0.1
4,528,320	+				+2.0
4,528,320	+		BWI76_RS21625	0.80	-1.6
4,528,320	+		BWI76_RS21625	0.80	+0.2
4,528,323	-		BWI76_RS21625	0.81	-0.1
4,528,327	+		BWI76_RS21625	0.83	-0.7
4,528,328	-		BWI76_RS21625	0.84	-2.9
4,528,328	-		BWI76_RS21625	0.84	-2.3
4,528,346	+				-1.5
4,528,346	+				-1.3
4,528,352	+				-1.6
4,528,354	-				-1.6
4,528,399	-				+1.0
4,528,403	+				-3.3
4,528,403	+				-0.3
4,528,403	+				-2.6
4,528,403	+				-2.3
4,528,403	+				-0.0
4,528,411	-				-1.6
4,528,411	-				-0.8
4,528,411	-				-0.0
4,528,411	-				-0.6
4,528,411	-				-1.0
4,528,411	-				-0.9
4,528,423	+				-2.0
4,528,423	+				-0.3
4,528,423	+				-0.2
4,528,540	+				-1.5
4,528,558	+				-0.1
4,528,577	-				-1.6
4,528,579	+				-1.0
4,528,602	+				-2.2
4,528,602	+				-2.3
4,528,602	+				-1.0
4,528,602	+				-1.3
4,528,602	+				-1.3
4,528,602	+				-3.9
4,528,610	-				-0.0
4,528,632	+				-0.2
4,528,645	+				-1.0
4,528,650	+				+1.0
4,528,650	+				-0.9
4,528,658	-				-0.9
4,528,659	+				-1.4
4,528,660	+				-2.3
4,528,665	+				-1.5
4,528,665	+				-0.0
4,528,665	+				-1.0
4,528,665	+				+0.5
4,528,665	+				-0.0
4,528,665	+				+1.6
4,528,665	+				+0.2
4,528,665	+				-0.8
4,528,665	+				+1.0
4,528,665	+				-0.6
4,528,665	+				-0.0
4,528,665	+				-1.8
4,528,665	+				+0.4
4,528,665	+				-1.2
4,528,665	+				-1.8
4,528,665	+				-1.2
4,528,665	+				-0.6
4,528,665	+				-0.4
4,528,665	+				+1.0
4,528,665	+				-1.8
4,528,665	+				+0.8
4,528,665	+				+0.3
4,528,665	+				-2.2
4,528,665	+				+0.3
4,528,665	+				-0.2
4,528,665	+				-0.6
4,528,665	+				-0.7
4,528,665	+				+1.0
4,528,665	+				-0.6
4,528,665	+				-0.4
4,528,665	+				-2.0
4,528,665	+				-0.9
4,528,665	+				+0.3
4,528,665	+				-2.9
4,528,665	+				-0.4
4,528,667	+				-0.6
4,528,667	-				-1.6
4,528,668	-				-0.9
4,528,668	-				-0.2
4,528,673	-				-2.3
4,528,673	-				-1.6
4,528,673	-				-0.1
4,528,673	-				+0.4
4,528,673	-				+0.7
4,528,673	-				+1.0
4,528,673	-				-3.5
4,528,673	-				-0.4
4,528,673	-				-0.7
4,528,673	-				-1.5
4,528,673	-				+0.4
4,528,673	-				+1.8
4,528,673	-				-0.3
4,528,673	-				-2.3
4,528,707	+				-0.6
4,528,810	+		BWI76_RS21630	0.14	-0.2
4,528,818	-		BWI76_RS21630	0.14	-0.7
4,528,820	+		BWI76_RS21630	0.14	+2.0
4,528,838	+		BWI76_RS21630	0.16	-0.0
4,528,840	+		BWI76_RS21630	0.16	-0.3
4,528,840	+		BWI76_RS21630	0.16	-1.3
4,528,843	-		BWI76_RS21630	0.16	+1.7
4,528,845	+		BWI76_RS21630	0.16	+4.0
4,528,849	+		BWI76_RS21630	0.16	-0.6
4,528,856	+		BWI76_RS21630	0.17	+0.6
4,528,875	+		BWI76_RS21630	0.18	+0.7
4,528,952	+		BWI76_RS21630	0.23	-2.0
4,528,956	+		BWI76_RS21630	0.23	+0.4
4,528,956	+		BWI76_RS21630	0.23	-0.0
4,528,961	+		BWI76_RS21630	0.23	+0.9
4,528,961	+		BWI76_RS21630	0.23	-1.6
4,528,964	-		BWI76_RS21630	0.23	-0.5
4,529,019	+		BWI76_RS21630	0.27	+1.6
4,529,019	+		BWI76_RS21630	0.27	+0.3
4,529,020	-		BWI76_RS21630	0.27	-0.4
4,529,027	-		BWI76_RS21630	0.27	-2.2
4,529,027	-				-0.6
4,529,042	+		BWI76_RS21630	0.28	+0.2
4,529,042	+		BWI76_RS21630	0.28	-0.0
4,529,050	-		BWI76_RS21630	0.29	-0.2
4,529,100	+		BWI76_RS21630	0.32	-0.6
4,529,101	+		BWI76_RS21630	0.32	-1.8
4,529,101	+		BWI76_RS21630	0.32	+0.6
4,529,101	+		BWI76_RS21630	0.32	-0.8
4,529,108	-		BWI76_RS21630	0.32	-1.0
4,529,109	-		BWI76_RS21630	0.32	-0.7
4,529,136	-		BWI76_RS21630	0.34	-1.1
4,529,138	+		BWI76_RS21630	0.34	-0.4
4,529,157	-		BWI76_RS21630	0.35	+1.1
4,529,158	+		BWI76_RS21630	0.35	-0.3
4,529,158	+		BWI76_RS21630	0.35	-0.5
4,529,158	+		BWI76_RS21630	0.35	+0.6
4,529,159	-		BWI76_RS21630	0.35	-0.2
4,529,166	-		BWI76_RS21630	0.36	-0.1
4,529,173	+		BWI76_RS21630	0.36	-0.3
4,529,179	-		BWI76_RS21630	0.37	+1.4
4,529,187	+		BWI76_RS21630	0.37	-0.7
4,529,189	+		BWI76_RS21630	0.37	-1.7
4,529,253	+		BWI76_RS21630	0.41	-2.0
4,529,254	+		BWI76_RS21630	0.41	-1.2
4,529,261	-		BWI76_RS21630	0.42	-1.0
4,529,262	-		BWI76_RS21630	0.42	-1.4
4,529,271	-		BWI76_RS21630	0.42	-0.0
4,529,299	+		BWI76_RS21630	0.44	-0.1
4,529,307	-		BWI76_RS21630	0.45	+0.2
4,529,308	+		BWI76_RS21630	0.45	-2.4
4,529,317	+		BWI76_RS21630	0.45	-0.8
4,529,329	+		BWI76_RS21630	0.46	-0.6
4,529,375	+		BWI76_RS21630	0.49	-0.0
4,529,376	+		BWI76_RS21630	0.49	-0.0
4,529,380	+		BWI76_RS21630	0.49	-2.5
4,529,380	+		BWI76_RS21630	0.49	-2.3
4,529,421	+		BWI76_RS21630	0.52	+1.3
4,529,454	+		BWI76_RS21630	0.54	-2.3
4,529,454	+		BWI76_RS21630	0.54	-0.6
4,529,454	+		BWI76_RS21630	0.54	-2.6
4,529,454	+		BWI76_RS21630	0.54	-1.0
4,529,454	+		BWI76_RS21630	0.54	-0.1
4,529,456	+		BWI76_RS21630	0.54	-2.1
4,529,462	-		BWI76_RS21630	0.54	-0.1
4,529,462	-		BWI76_RS21630	0.54	-0.7
4,529,462	-		BWI76_RS21630	0.54	-1.3
4,529,462	-		BWI76_RS21630	0.54	-1.2
4,529,462	-		BWI76_RS21630	0.54	-1.1
4,529,462	-		BWI76_RS21630	0.54	-0.3
4,529,462	-		BWI76_RS21630	0.54	+1.0
4,529,462	-		BWI76_RS21630	0.54	+1.3
4,529,462	-		BWI76_RS21630	0.54	-1.6
4,529,464	+		BWI76_RS21630	0.54	-0.1
4,529,464	+		BWI76_RS21630	0.54	-1.5
4,529,464	-		BWI76_RS21630	0.54	-0.6
4,529,469	+		BWI76_RS21630	0.55	+1.0
4,529,469	+		BWI76_RS21630	0.55	-0.1
4,529,477	-		BWI76_RS21630	0.55	-0.1
4,529,485	+		BWI76_RS21630	0.56	+2.6
4,529,487	-		BWI76_RS21630	0.56	+0.2
4,529,517	+		BWI76_RS21630	0.58	-0.4
4,529,543	-		BWI76_RS21630	0.59	-1.6
4,529,578	-		BWI76_RS21630	0.61	-0.6
4,529,593	+		BWI76_RS21630	0.62	-0.4
4,529,620	+		BWI76_RS21630	0.64	-1.0
4,529,620	+		BWI76_RS21630	0.64	-0.4
4,529,620	+		BWI76_RS21630	0.64	-0.3
4,529,628	+		BWI76_RS21630	0.65	-0.4
4,529,628	-		BWI76_RS21630	0.65	-0.8
4,529,628	-		BWI76_RS21630	0.65	+0.2
4,529,628	-		BWI76_RS21630	0.65	-0.1
4,529,628	-		BWI76_RS21630	0.65	+0.4
4,529,636	-		BWI76_RS21630	0.65	-0.0
4,529,656	+		BWI76_RS21630	0.66	-2.7
4,529,664	-		BWI76_RS21630	0.67	+0.3
4,529,690	+		BWI76_RS21630	0.68	-1.1
4,529,696	+		BWI76_RS21630	0.69	+0.4
4,529,696	+		BWI76_RS21630	0.69	+0.6
4,529,696	+		BWI76_RS21630	0.69	-0.6
4,529,696	+		BWI76_RS21630	0.69	-0.0
4,529,696	+		BWI76_RS21630	0.69	-0.4
4,529,696	+		BWI76_RS21630	0.69	+0.1
4,529,696	+		BWI76_RS21630	0.69	-1.5
4,529,703	-		BWI76_RS21630	0.69	-3.3
4,529,704	-		BWI76_RS21630	0.69	-0.2
4,529,704	-		BWI76_RS21630	0.69	+0.4
4,529,705	-		BWI76_RS21630	0.69	+0.5
4,529,734	+		BWI76_RS21630	0.71	+1.0
4,529,739	+		BWI76_RS21630	0.71	-1.3
4,529,759	+		BWI76_RS21630	0.73	-0.0
4,529,763	+		BWI76_RS21630	0.73	+0.1
4,529,763	+		BWI76_RS21630	0.73	+1.6
4,529,763	+		BWI76_RS21630	0.73	-0.0
4,529,817	+				+1.0
4,529,817	+		BWI76_RS21630	0.76	-0.0
4,529,817	+		BWI76_RS21630	0.76	+0.3
4,529,843	+		BWI76_RS21630	0.78	+1.0
4,529,843	+		BWI76_RS21630	0.78	+1.0
4,529,843	+		BWI76_RS21630	0.78	+0.2
4,529,866	+		BWI76_RS21630	0.79	-1.5
4,529,873	+		BWI76_RS21630	0.80	-0.4
4,529,874	-		BWI76_RS21630	0.80	+1.1
4,529,876	+		BWI76_RS21630	0.80	-1.3
4,529,941	+		BWI76_RS21630	0.84	-2.0
4,529,942	+		BWI76_RS21630	0.84	-0.6
4,529,942	+		BWI76_RS21630	0.84	-0.9
4,529,942	+		BWI76_RS21630	0.84	-0.8
4,529,947	+		BWI76_RS21630	0.84	+0.8
4,529,950	-		BWI76_RS21630	0.85	-1.1
4,529,963	-		BWI76_RS21630	0.85	-1.7
4,529,963	-		BWI76_RS21630	0.85	-0.6
4,529,970	+		BWI76_RS21630	0.86	-2.2
4,529,980	+		BWI76_RS21630	0.86	-0.3
4,529,991	+		BWI76_RS21630	0.87	-0.6
4,529,999	+		BWI76_RS21630	0.88	-0.4
4,530,004	+		BWI76_RS21630	0.88	-0.9
4,530,045	+				+0.6
4,530,045	+				+1.0
4,530,045	+				-0.7
4,530,045	+				-0.7
4,530,045	+				-1.5
4,530,045	+				+0.2
4,530,045	+				-1.1
4,530,045	+				-2.3
4,530,052	+				-0.7
4,530,052	+				-1.7
4,530,052	+				-0.6
4,530,052	+				+1.0
4,530,053	-				-1.8
4,530,053	-				-0.6
4,530,053	-				+1.6
4,530,060	-				-3.0
4,530,060	-				-0.0
4,530,060	-				-0.5
4,530,060	-				-1.4
4,530,061	+				-2.2
4,530,070	-				-0.2
4,530,070	-				+1.0
4,530,078	+				-0.0
4,530,098	+				-0.3
4,530,161	+				-2.0
4,530,177	+				-0.7
4,530,183	-				-0.1
4,530,207	+				-0.4
4,530,207	+				-1.6
4,530,207	+				-3.6
4,530,207	+				-1.3
4,530,207	+				-0.1
4,530,207	+				-1.0
4,530,207	+				+0.1
4,530,207	+				+0.4
4,530,209	+				+1.0
4,530,209	+				+0.3
4,530,214	+				-0.1
4,530,214	+				-0.6
4,530,215	-				-0.1
4,530,215	-				-0.0
4,530,221	+				-0.6
4,530,228	+				-0.6
4,530,234	+				-0.4
4,530,235	+				-2.2
4,530,235	+				+2.6
4,530,235	+				+0.2
4,530,243	-				+1.0
4,530,244	+				+1.2
4,530,252	-				-0.0
4,530,252	-				-1.0
4,530,274	+				-0.8
4,530,274	+				+1.0
4,530,274	+				-1.1
4,530,274	+				-0.0
4,530,274	+				+1.1
4,530,281	+				+0.1
4,530,282	-				+1.4
4,530,282	-				-0.1
4,530,289	-				-1.6
4,530,291	+				+1.0
4,530,299	-				-2.0
4,530,299	-				-2.6
4,530,301	+				+1.3
4,530,310	-				+1.0
4,530,310	-				-1.3
4,530,331	-				+0.8
4,530,336	-				-1.0
4,530,359	-				-0.5
4,530,370	-				+1.0
4,530,370	-				-1.0
4,530,370	-				-0.8
4,530,370	-				-1.3
4,530,374	+				+1.0
4,530,377	-				+0.8
4,530,377	-				+2.0
4,530,380	-				-0.2
4,530,392	-				-0.1
4,530,668	-				-0.6
4,530,674	+				-1.6
4,530,682	-				+0.1
4,530,682	-				+1.0
4,530,682	-				-1.0
4,530,682	-				-2.6
4,530,682	-				-1.3
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4,530,792	+				+1.0
4,530,820	+				+0.8
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4,531,180	+		BWI76_RS21635	0.37	+1.0
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