Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS14915

Experiment: RCH2_defined_noCarbon with Mixed culture; Dyella japonica UNC79MFTsu3.2 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_noCarbon with Mixed culture; Dyella japonica UNC79MFTsu3.2 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x
3,125,509	+				+1.3
3,125,509	-				+1.7
3,125,509	-				+0.8
3,125,509	-				+2.9
3,125,509	-				-0.1
3,125,517	-				+1.6
3,125,517	-				-0.4
3,125,517	-				-1.6
3,125,524	+				-0.7
3,125,550	-				+0.0
3,125,550	-				+1.3
3,125,550	-				+0.2
3,125,550	-				-1.3
3,125,550	-				-1.6
3,125,550	-				+0.0
3,125,550	-				-0.7
3,125,550	-				-1.0
3,125,632	-				+1.0
3,125,632	-				+0.0
3,125,632	-				+1.0
3,125,636	+				+1.4
3,125,644	-				+0.2
3,125,644	-				+0.0
3,125,788	-				+1.2
3,126,058	+				-2.3
3,126,101	+				+0.1
3,126,104	+				-0.6
3,126,134	+				-0.3
3,126,155	+				-0.7
3,126,166	+				-2.0
3,126,166	+				+2.6
3,126,173	+				+0.2
3,126,173	+				-2.3
3,126,173	+				-1.4
3,126,190	+				-0.6
3,126,201	+				+1.3
3,126,229	+				+0.7
3,126,239	+				-0.1
3,126,244	+				+1.4
3,126,247	+				+1.6
3,126,255	-				-0.7
3,126,271	+				+0.8
3,126,271	+				+0.0
3,126,279	-				-0.2
3,126,279	-				-1.8
3,126,279	-				-1.6
3,126,279	-				-0.2
3,126,332	+				+0.2
3,126,334	-				-0.6
3,126,337	+				-0.5
3,126,337	+				+0.0
3,126,342	+				-0.9
3,126,344	+				-0.5
3,126,351	+				-0.9
3,126,352	-				-1.0
3,126,367	+				-0.3
3,126,456	-				+0.3
3,126,456	-				-1.8
3,126,583	+		BWI76_RS14915	0.22	-1.0
3,126,591	-				+0.0
3,126,615	-		BWI76_RS14915	0.29	-1.0
3,126,711	-				-1.9
3,126,713	-		BWI76_RS14915	0.48	-1.4
3,126,877	-		BWI76_RS14915	0.80	+1.0
3,126,882	-		BWI76_RS14915	0.81	-1.6
3,126,891	-		BWI76_RS14915	0.83	-2.1
3,126,983	-				+0.5
3,126,994	-				+0.0
3,127,086	+				+0.7
3,127,153	-				+0.5
3,127,155	+				-2.3
3,127,368	+				-1.0
3,127,376	-				-2.3
3,127,401	+				+1.1
3,127,426	+				+1.0
3,127,541	-		BWI76_RS14920	0.14	+0.5
3,127,616	+		BWI76_RS14920	0.21	+4.2
3,127,710	-		BWI76_RS14920	0.30	+0.4
3,127,763	+		BWI76_RS14920	0.36	-0.8
3,127,771	-		BWI76_RS14920	0.37	+0.5
3,127,777	-		BWI76_RS14920	0.37	+0.6
3,127,856	+		BWI76_RS14920	0.45	-0.3