Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS04365

Experiment: RCH2_defined_noCarbon with Mixed culture; Dyella japonica UNC79MFTsu3.2 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_noCarbon with Mixed culture; Dyella japonica UNC79MFTsu3.2 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x
897,853	+				-0.1
897,853	+				+1.0
898,063	-		BWI76_RS04360	0.19	+0.5
898,115	-		BWI76_RS04360	0.25	+0.7
898,350	+		BWI76_RS04360	0.51	-0.6
898,453	-				+2.6
898,558	+		BWI76_RS04360	0.73	-0.1
898,628	+		BWI76_RS04360	0.81	+1.2
898,834	-				-0.7
898,953	+		BWI76_RS04365	0.13	-0.1
899,063	-		BWI76_RS04365	0.25	+0.7
899,113	-		BWI76_RS04365	0.30	-0.3
899,193	+		BWI76_RS04365	0.39	-0.2
899,199	+		BWI76_RS04365	0.39	+0.2
899,210	-		BWI76_RS04365	0.40	-0.7
899,267	-		BWI76_RS04365	0.47	+0.6
899,296	-		BWI76_RS04365	0.50	+0.3
899,346	+		BWI76_RS04365	0.55	-1.1
899,355	-		BWI76_RS04365	0.56	-0.0
899,369	-		BWI76_RS04365	0.57	-0.6
899,372	+		BWI76_RS04365	0.58	-0.6
899,372	+		BWI76_RS04365	0.58	+1.0
899,372	+				+1.0
899,372	+		BWI76_RS04365	0.58	-2.7
899,372	+		BWI76_RS04365	0.58	-0.0
899,372	+		BWI76_RS04365	0.58	-0.0
899,374	+		BWI76_RS04365	0.58	-2.0
899,374	+		BWI76_RS04365	0.58	-0.7
899,374	+		BWI76_RS04365	0.58	-0.0
899,378	-		BWI76_RS04365	0.58	-1.5
899,378	-		BWI76_RS04365	0.58	-0.0
899,378	-		BWI76_RS04365	0.58	-2.7
899,380	-		BWI76_RS04365	0.59	-1.2
899,380	-		BWI76_RS04365	0.59	-1.0
899,380	-		BWI76_RS04365	0.59	-1.5
899,380	-		BWI76_RS04365	0.59	+1.0
899,380	-		BWI76_RS04365	0.59	-0.4
899,380	-		BWI76_RS04365	0.59	-0.5
899,382	-		BWI76_RS04365	0.59	+3.6
899,475	+		BWI76_RS04365	0.69	+1.2
899,478	-		BWI76_RS04365	0.69	+0.2
899,480	+		BWI76_RS04365	0.69	-1.0
899,480	+		BWI76_RS04365	0.69	-0.0
899,512	+		BWI76_RS04365	0.73	-0.8
899,519	+				+0.2
899,534	+		BWI76_RS04365	0.75	-0.8
899,562	-		BWI76_RS04365	0.78	-1.3
899,562	-		BWI76_RS04365	0.78	+0.3
899,562	-		BWI76_RS04365	0.78	-0.2
899,562	-		BWI76_RS04365	0.78	-0.1
899,596	-				+1.0
899,622	-		BWI76_RS04365	0.84	-0.9
899,624	+		BWI76_RS04365	0.85	-0.0
899,664	+		BWI76_RS04365	0.89	-2.7
899,674	+		BWI76_RS04365	0.90	-0.6
899,678	+				-0.2
899,678	+				+1.0
899,678	+				-0.6
899,678	+				-0.6
899,683	+				-0.0
899,683	+				+0.3
899,683	+				-0.6
899,683	+				+1.0
899,683	+				-1.2
899,686	-				-0.0
899,686	-				+1.6
899,688	+				-0.0
899,688	-				-1.3
899,691	-				-0.0
899,691	-				-2.6
899,691	-				-0.0
899,691	-				-0.9
899,691	-				-0.7
899,691	-				-0.6
899,691	-				+1.0
899,691	-				+0.5
899,701	+				-1.3
899,723	+				+1.0
899,723	-				-1.3
899,723	-				+0.7
899,731	-				-1.1
899,731	-				-2.7
899,776	+				-1.3
899,781	-				-0.2
899,784	-				+0.2
899,784	-				-0.1
899,786	-				-1.4
899,792	+				-2.2
899,805	-				-1.6
899,805	-				-1.2
899,901	-				-0.0
899,931	-				+0.4
899,999	+				-0.0
900,004	+				+0.1
900,004	+				+1.0
900,004	+				-1.4
900,004	+				-2.0
900,004	+				-3.5
900,004	+				-0.6
900,004	+				+0.6
900,012	-				-1.0
900,012	-				+1.3
900,012	-				-0.0
900,045	+				-0.1
900,062	-				+1.0
900,066	+				+1.0
900,074	-				-0.9
900,164	-		BWI76_RS04370	0.11	-0.5
900,173	-		BWI76_RS04370	0.12	-3.3
900,194	+		BWI76_RS04370	0.14	-0.7
900,198	+		BWI76_RS04370	0.14	-1.2
900,198	+		BWI76_RS04370	0.14	+0.4
900,206	-		BWI76_RS04370	0.15	+1.0
900,210	+		BWI76_RS04370	0.15	-0.3
900,218	-		BWI76_RS04370	0.16	-0.0
900,225	-		BWI76_RS04370	0.17	-2.7
900,225	-		BWI76_RS04370	0.17	-0.6
900,246	-		BWI76_RS04370	0.19	-1.0
900,279	+				+1.0
900,305	+		BWI76_RS04370	0.24	-1.8
900,315	+		BWI76_RS04370	0.25	-1.3
900,323	-		BWI76_RS04370	0.26	+1.2
900,328	+		BWI76_RS04370	0.27	-0.5
900,330	+		BWI76_RS04370	0.27	-3.1
900,330	+		BWI76_RS04370	0.27	+0.7
900,352	+		BWI76_RS04370	0.29	-2.8
900,365	+		BWI76_RS04370	0.30	-0.3
900,370	+		BWI76_RS04370	0.30	-0.0
900,447	-		BWI76_RS04370	0.38	-1.9
900,447	-		BWI76_RS04370	0.38	-1.3
900,461	+		BWI76_RS04370	0.39	-1.8
900,474	-		BWI76_RS04370	0.40	+0.2
900,489	-		BWI76_RS04370	0.42	-0.0
900,501	+		BWI76_RS04370	0.43	+2.2
900,509	-		BWI76_RS04370	0.44	-0.0
900,551	+		BWI76_RS04370	0.48	-0.0
900,564	-		BWI76_RS04370	0.49	-0.2
900,578	+		BWI76_RS04370	0.50	+1.0
900,604	+		BWI76_RS04370	0.53	+1.0
900,604	+		BWI76_RS04370	0.53	-1.0
900,604	+		BWI76_RS04370	0.53	+0.2
900,612	-		BWI76_RS04370	0.53	-0.0
900,612	-		BWI76_RS04370	0.53	+1.2
900,619	+		BWI76_RS04370	0.54	-0.1
900,619	+		BWI76_RS04370	0.54	+0.2
900,622	-		BWI76_RS04370	0.54	+0.7
900,624	-		BWI76_RS04370	0.55	-0.3
900,627	-		BWI76_RS04370	0.55	-0.6
900,635	+		BWI76_RS04370	0.56	+0.7
900,643	-		BWI76_RS04370	0.56	-2.2
900,645	-		BWI76_RS04370	0.57	-0.8
900,645	-		BWI76_RS04370	0.57	-0.6
900,649	+				+1.0
900,657	-		BWI76_RS04370	0.58	-0.2
900,665	+		BWI76_RS04370	0.58	-1.0
900,699	+		BWI76_RS04370	0.62	+1.0
900,704	+		BWI76_RS04370	0.62	-1.5
900,735	+		BWI76_RS04370	0.65	+0.9
900,735	+		BWI76_RS04370	0.65	-1.6
900,743	-		BWI76_RS04370	0.66	-1.2
900,755	+				+1.0
900,755	+		BWI76_RS04370	0.67	+1.0
900,756	+		BWI76_RS04370	0.67	-1.0
900,762	+		BWI76_RS04370	0.68	-0.2
900,764	-		BWI76_RS04370	0.68	-0.9