Experiment: RCH2_defined_noCarbon with Mixed culture; Ralstonia sp. UNC404CL21Col 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS27595 and BWI76_RS27600 are separated by 291 nucleotides BWI76_RS27600 and BWI76_RS27605 are separated by 38 nucleotides BWI76_RS27605 and BWI76_RS27610 are separated by 326 nucleotides
BWI76_RS27595: BWI76_RS27595 - glycoside-pentoside-hexuronide family transporter, at 5,728,796 to 5,730,190
_RS27595
BWI76_RS27600: BWI76_RS27600 - tRNA-Sec, at 5,730,482 to 5,730,576
_RS27600
BWI76_RS27605: BWI76_RS27605 - hypothetical protein, at 5,730,615 to 5,730,806
_RS27605
BWI76_RS27610: BWI76_RS27610 - hydroxyacid dehydrogenase, at 5,731,133 to 5,731,647
_RS27610
Position (kb) 5730
5731 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 5729.699 kb on - strand, within BWI76_RS27595 at 5729.754 kb on + strand, within BWI76_RS27595 at 5729.764 kb on + strand, within BWI76_RS27595 at 5729.767 kb on - strand, within BWI76_RS27595 at 5729.792 kb on - strand, within BWI76_RS27595 at 5729.820 kb on + strand, within BWI76_RS27595 at 5729.820 kb on + strand, within BWI76_RS27595 at 5729.820 kb on + strand, within BWI76_RS27595 at 5729.820 kb on + strand, within BWI76_RS27595 at 5729.828 kb on - strand, within BWI76_RS27595 at 5729.847 kb on - strand at 5729.865 kb on + strand, within BWI76_RS27595 at 5729.895 kb on + strand, within BWI76_RS27595 at 5729.903 kb on - strand, within BWI76_RS27595 at 5730.549 kb on - strand, within BWI76_RS27600 at 5730.559 kb on - strand, within BWI76_RS27600 at 5730.559 kb on - strand, within BWI76_RS27600 at 5730.602 kb on - strand at 5730.673 kb on - strand, within BWI76_RS27605 at 5730.689 kb on + strand, within BWI76_RS27605 at 5730.856 kb on + strand at 5730.866 kb on + strand at 5730.987 kb on - strand at 5731.123 kb on - strand at 5731.161 kb on + strand at 5731.265 kb on + strand, within BWI76_RS27610 at 5731.273 kb on - strand, within BWI76_RS27610 at 5731.298 kb on + strand, within BWI76_RS27610 at 5731.576 kb on - strand, within BWI76_RS27610
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_noCarbon with Mixed culture; Ralstonia sp. UNC404CL21Col 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x remove 5,729,699 - BWI76_RS27595 0.65 -2.2 5,729,754 + BWI76_RS27595 0.69 +0.6 5,729,764 + BWI76_RS27595 0.69 +0.2 5,729,767 - BWI76_RS27595 0.70 +1.3 5,729,792 - BWI76_RS27595 0.71 -1.0 5,729,820 + BWI76_RS27595 0.73 +0.3 5,729,820 + BWI76_RS27595 0.73 +0.9 5,729,820 + BWI76_RS27595 0.73 +0.9 5,729,820 + BWI76_RS27595 0.73 +2.4 5,729,828 - BWI76_RS27595 0.74 +0.8 5,729,847 - +3.5 5,729,865 + BWI76_RS27595 0.77 +0.4 5,729,895 + BWI76_RS27595 0.79 +1.6 5,729,903 - BWI76_RS27595 0.79 -1.9 5,730,549 - BWI76_RS27600 0.71 -3.0 5,730,559 - BWI76_RS27600 0.81 -2.5 5,730,559 - BWI76_RS27600 0.81 +0.1 5,730,602 - +0.8 5,730,673 - BWI76_RS27605 0.30 -3.7 5,730,689 + BWI76_RS27605 0.39 +0.2 5,730,856 + +0.3 5,730,866 + -0.4 5,730,987 - -0.1 5,731,123 - -0.5 5,731,161 + -1.0 5,731,265 + BWI76_RS27610 0.26 +0.3 5,731,273 - BWI76_RS27610 0.27 -1.8 5,731,298 + BWI76_RS27610 0.32 +0.4 5,731,576 - BWI76_RS27610 0.86 +0.2
Or see this region's nucleotide sequence