Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS21770

Experiment: RCH2_defined_noCarbon with Mixed culture; Ralstonia sp. UNC404CL21Col 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_noCarbon with Mixed culture; Ralstonia sp. UNC404CL21Col 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x
4,549,045	-		BWI76_RS21765	0.12	+1.8
4,549,128	-		BWI76_RS21765	0.21	+0.7
4,549,184	-		BWI76_RS21765	0.27	+1.4
4,549,186	+		BWI76_RS21765	0.27	+0.5
4,549,194	-		BWI76_RS21765	0.28	-0.1
4,549,253	+		BWI76_RS21765	0.34	+1.2
4,549,272	+		BWI76_RS21765	0.36	-1.3
4,549,333	+		BWI76_RS21765	0.42	-1.2
4,549,409	+		BWI76_RS21765	0.50	+0.6
4,549,472	-		BWI76_RS21765	0.57	+0.5
4,549,499	+		BWI76_RS21765	0.60	+0.3
4,549,555	-		BWI76_RS21765	0.65	-2.9
4,549,597	+		BWI76_RS21765	0.70	-0.7
4,549,597	+		BWI76_RS21765	0.70	+0.2
4,549,597	+		BWI76_RS21765	0.70	-0.3
4,549,597	+		BWI76_RS21765	0.70	+1.4
4,549,597	+		BWI76_RS21765	0.70	+0.2
4,549,605	-		BWI76_RS21765	0.71	-1.4
4,549,605	-		BWI76_RS21765	0.71	-0.8
4,549,605	-		BWI76_RS21765	0.71	-0.0
4,549,605	-		BWI76_RS21765	0.71	-1.5
4,549,605	-		BWI76_RS21765	0.71	+0.1
4,549,659	-		BWI76_RS21765	0.76	-0.6
4,549,733	-		BWI76_RS21765	0.84	+0.4
4,549,812	+				+0.3
4,549,819	+				+0.6
4,549,822	-				-0.5
4,550,019	-		BWI76_RS21770	0.11	-0.5
4,550,022	+		BWI76_RS21770	0.11	-1.0
4,550,029	-		BWI76_RS21770	0.13	-1.3
4,550,056	+		BWI76_RS21770	0.20	+0.1
4,550,056	+		BWI76_RS21770	0.20	-1.5
4,550,056	+		BWI76_RS21770	0.20	-3.4
4,550,064	-		BWI76_RS21770	0.21	-0.8
4,550,064	-		BWI76_RS21770	0.21	-0.1
4,550,102	+		BWI76_RS21770	0.31	-1.0
4,550,156	+		BWI76_RS21770	0.44	+2.1
4,550,166	+		BWI76_RS21770	0.46	-3.4
4,550,169	-		BWI76_RS21770	0.47	+0.8
4,550,183	+		BWI76_RS21770	0.50	+0.8
4,550,183	+		BWI76_RS21770	0.50	-0.5
4,550,183	+		BWI76_RS21770	0.50	+0.2
4,550,183	+		BWI76_RS21770	0.50	-2.0
4,550,183	+		BWI76_RS21770	0.50	-0.8
4,550,183	+		BWI76_RS21770	0.50	+0.8
4,550,183	+		BWI76_RS21770	0.50	-1.3
4,550,191	-		BWI76_RS21770	0.52	-0.3
4,550,201	-		BWI76_RS21770	0.55	-0.4
4,550,209	+		BWI76_RS21770	0.57	-0.6
4,550,224	+		BWI76_RS21770	0.60	-0.2
4,550,256	+		BWI76_RS21770	0.68	-0.7
4,550,262	+				-0.8
4,550,262	+		BWI76_RS21770	0.69	+0.6
4,550,270	-		BWI76_RS21770	0.71	-0.1
4,550,270	-		BWI76_RS21770	0.71	+0.8
4,550,272	+		BWI76_RS21770	0.72	-1.5
4,550,272	+		BWI76_RS21770	0.72	-1.4
4,550,272	+		BWI76_RS21770	0.72	+0.2
4,550,272	+		BWI76_RS21770	0.72	-0.0
4,550,272	+		BWI76_RS21770	0.72	-0.7
4,550,272	+		BWI76_RS21770	0.72	-0.2
4,550,272	+		BWI76_RS21770	0.72	-3.3
4,550,272	+		BWI76_RS21770	0.72	-0.2
4,550,280	-		BWI76_RS21770	0.74	-2.0
4,550,280	-		BWI76_RS21770	0.74	+1.8
4,550,280	-		BWI76_RS21770	0.74	-1.5
4,550,280	-		BWI76_RS21770	0.74	-1.8
4,550,287	+		BWI76_RS21770	0.75	-0.2
4,550,292	+		BWI76_RS21770	0.77	-1.7
4,550,307	+		BWI76_RS21770	0.80	-0.0
4,550,384	-				-0.3
4,550,429	+				+0.6
4,550,438	+				-2.6
4,550,457	+				-1.2
4,550,469	+				-0.8
4,550,471	+				-2.6
4,550,479	+				-2.6
4,550,479	+				-1.2
4,550,479	+				-3.3
4,550,483	+				-1.8
4,550,493	+				+1.5
4,550,503	+				-1.8
4,550,503	+				-0.3
4,550,503	+				-0.2
4,550,841	+		BWI76_RS21775	0.13	-0.7
4,550,849	-		BWI76_RS21775	0.14	-0.2
4,550,938	-		BWI76_RS21775	0.23	-3.3
4,550,949	+		BWI76_RS21775	0.24	-1.8
4,550,951	+		BWI76_RS21775	0.24	-2.8
4,550,951	+		BWI76_RS21775	0.24	-0.2
4,550,951	+		BWI76_RS21775	0.24	-2.3
4,550,951	+		BWI76_RS21775	0.24	+0.2
4,550,951	+		BWI76_RS21775	0.24	+1.2
4,550,951	+		BWI76_RS21775	0.24	+1.6
4,550,959	-		BWI76_RS21775	0.25	-0.0
4,550,959	-		BWI76_RS21775	0.25	+0.8
4,550,959	-		BWI76_RS21775	0.25	+1.4
4,550,959	-		BWI76_RS21775	0.25	-0.8
4,550,959	-		BWI76_RS21775	0.25	+0.8
4,550,959	-		BWI76_RS21775	0.25	+0.8
4,550,959	-		BWI76_RS21775	0.25	-0.8
4,550,994	+		BWI76_RS21775	0.29	-1.2
4,551,018	-		BWI76_RS21775	0.31	+0.1
4,551,018	-		BWI76_RS21775	0.31	-0.2
4,551,027	+		BWI76_RS21775	0.32	-1.8
4,551,035	-		BWI76_RS21775	0.33	-2.0
4,551,035	-		BWI76_RS21775	0.33	+0.6
4,551,035	-		BWI76_RS21775	0.33	-0.2
4,551,035	-		BWI76_RS21775	0.33	+0.2
4,551,074	+		BWI76_RS21775	0.37	+0.8
4,551,082	-		BWI76_RS21775	0.38	-0.8
4,551,082	-				-2.0
4,551,084	+		BWI76_RS21775	0.38	+0.8
4,551,084	+		BWI76_RS21775	0.38	+0.7
4,551,092	-		BWI76_RS21775	0.39	-0.2
4,551,095	-		BWI76_RS21775	0.39	-0.2
4,551,158	+		BWI76_RS21775	0.46	+0.6
4,551,166	-		BWI76_RS21775	0.47	-0.2
4,551,166	-		BWI76_RS21775	0.47	-0.2
4,551,173	+		BWI76_RS21775	0.48	-2.2
4,551,176	-		BWI76_RS21775	0.48	-1.2
4,551,235	+		BWI76_RS21775	0.54	+0.9
4,551,237	+		BWI76_RS21775	0.54	-3.3
4,551,283	+		BWI76_RS21775	0.59	+0.3
4,551,291	-		BWI76_RS21775	0.60	-0.8
4,551,331	+		BWI76_RS21775	0.64	-1.3
4,551,331	+		BWI76_RS21775	0.64	-1.3
4,551,339	-		BWI76_RS21775	0.65	-1.0
4,551,358	+		BWI76_RS21775	0.67	+0.8
4,551,366	+		BWI76_RS21775	0.68	+0.1
4,551,366	+		BWI76_RS21775	0.68	-0.8
4,551,374	-				-0.2