Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS19160

Experiment: RCH2_defined_noCarbon with Mixed culture; Ralstonia sp. UNC404CL21Col 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_noCarbon with Mixed culture; Ralstonia sp. UNC404CL21Col 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x
3,985,415	-				+0.9
3,985,440	-				+3.8
3,985,587	+				-0.1
3,985,590	-				-0.2
3,985,597	-				+1.4
3,985,613	-				+0.1
3,985,614	-				-0.2
3,985,734	+				-0.6
3,985,742	-				+2.1
3,985,742	-				-2.6
3,985,756	+				-2.2
3,985,756	+				-0.3
3,985,764	-				+0.6
3,985,764	-				-1.9
3,985,764	-				+0.3
3,985,798	+				-0.8
3,985,800	+				-0.1
3,985,800	+				-2.0
3,985,800	+				+0.8
3,985,800	+				-0.8
3,985,801	-				+0.2
3,985,801	-				-1.0
3,985,808	-				-1.4
3,985,808	-				+0.3
3,985,808	-				-1.7
3,985,808	-				+0.8
3,985,808	-				-2.1
3,985,808	-				-2.7
3,985,808	-				-0.4
3,985,808	-				+0.7
3,985,808	-				-1.9
3,985,808	-				-0.2
3,985,808	-				-1.2
3,985,810	+				-1.8
3,985,810	+				-0.0
3,985,812	+				+0.3
3,985,818	-				-1.4
3,985,818	-				-1.6
3,985,818	-				+0.6
3,985,818	-				+0.6
3,985,820	-				-2.0
3,985,825	+				-0.2
3,985,831	+				+0.8
3,985,839	-				+2.8
3,985,844	-				+0.7
3,985,844	-				-0.5
3,985,854	-				+0.5
3,985,879	-				-0.4
3,985,912	-				-0.9
3,985,981	+				+0.3
3,985,998	-				-2.0
3,986,058	+				+0.8
3,986,063	+				-1.1
3,986,063	+				-0.8
3,986,063	+				+0.8
3,986,066	-				-2.6
3,986,071	-				-1.7
3,986,071	-				-0.8
3,986,073	+				-2.6
3,986,073	+				-0.6
3,986,073	+				+0.8
3,986,073	+				+0.2
3,986,073	+				+1.2
3,986,081	-				+1.3
3,986,081	-				-2.6
3,986,081	-				+1.2
3,986,101	-				-3.0
3,986,118	+				-3.9
3,986,118	+				+0.4
3,986,126	-				-0.8
3,986,126	-				+0.8
3,986,128	+				+1.8
3,986,133	+				-1.1
3,986,136	-				-1.2
3,986,136	-				-0.4
3,986,138	+				-1.2
3,986,138	+				-0.2
3,986,141	-				+0.1
3,986,146	-				+0.8
3,986,162	+				+0.4
3,986,163	+				+1.1
3,986,163	+				-1.8
3,986,168	+				-0.8
3,986,170	-				+0.3
3,986,171	-				+0.2
3,986,186	+				+0.8
3,986,187	+				-0.1
3,986,194	-				-0.8
3,986,195	-				-0.0
3,986,200	+				+0.4
3,986,218	-				-3.4
3,986,231	+				-0.2
3,986,231	+				-1.6
3,986,231	+				-0.2
3,986,231	+				-0.8
3,986,239	-				-0.7
3,986,239	-				+0.3
3,986,239	-				-0.1
3,986,239	-				-1.1
3,986,239	-				-0.7
3,986,250	+				+0.0
3,986,300	+				-0.5
3,986,308	-				-0.0
3,986,331	+				-1.1
3,986,341	-				-1.2
3,986,344	-				+0.1
3,986,353	+				-0.1
3,986,369	+				-1.6
3,986,380	+				-1.7
3,986,396	-				-2.9
3,986,400	+				+0.5
3,986,408	-				+0.2
3,986,444	+				-0.8
3,986,454	-				+0.2
3,986,694	+		BWI76_RS19160	0.20	+1.1
3,986,971	+		BWI76_RS19160	0.35	+0.7
3,987,038	+		BWI76_RS19160	0.38	-0.4
3,987,284	+		BWI76_RS19160	0.51	+1.5
3,987,305	+		BWI76_RS19160	0.52	+0.7
3,987,425	-		BWI76_RS19160	0.58	+1.6
3,987,454	+		BWI76_RS19160	0.60	-2.7
3,987,562	-		BWI76_RS19160	0.66	-1.9
3,987,583	-		BWI76_RS19160	0.67	+1.3
3,987,777	+		BWI76_RS19160	0.77	+0.7
3,987,878	+		BWI76_RS19160	0.82	+0.9
3,987,889	-		BWI76_RS19160	0.83	+2.9
3,988,071	-				-0.1
3,988,071	-				-0.2
3,988,084	+				+0.5
3,988,084	+				-1.7
3,988,084	+				+0.1
3,988,084	+				-1.6
3,988,092	-				+0.3
3,988,092	-				+0.5
3,988,134	-				+2.2
3,988,212	+				+0.1
3,988,220	-				-3.0
3,988,290	+		BWI76_RS19165	0.11	+0.8
3,988,371	+		BWI76_RS19165	0.22	-0.4
3,988,403	-		BWI76_RS19165	0.27	-0.3
3,988,485	-		BWI76_RS19165	0.39	+0.8
3,988,521	-		BWI76_RS19165	0.44	+0.8
3,988,548	+		BWI76_RS19165	0.48	-0.1
3,988,651	+		BWI76_RS19165	0.63	+0.8
3,988,712	-		BWI76_RS19165	0.71	+1.1
3,988,729	-		BWI76_RS19165	0.74	+4.4
3,988,745	-		BWI76_RS19165	0.76	-1.4
3,988,777	+		BWI76_RS19165	0.81	+0.3
3,988,865	-				+0.4
3,988,906	+				+0.0
3,988,914	-				+0.7
3,988,914	-				+0.8
3,988,949	+				-0.7
3,988,957	-				+0.5
3,989,082	+				+0.4
3,989,090	-				-0.6
3,989,104	+				-0.8
3,989,104	+				-1.4
3,989,108	-				-4.0
3,989,123	+				-2.1
3,989,172	+				-0.4
3,989,172	+				+0.8
3,989,172	+				+0.8
3,989,172	+				-3.5
3,989,180	-				-2.2
3,989,180	-				-0.6
3,989,180	-				-2.2
3,989,180	-				-1.4
3,989,198	+				-0.8