Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS15485

Experiment: RCH2_defined_noCarbon with Mixed culture; Ralstonia sp. UNC404CL21Col 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_noCarbon with Mixed culture; Ralstonia sp. UNC404CL21Col 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x
3,243,241	-				-0.2
3,243,323	+				-0.8
3,243,475	+		BWI76_RS15480	0.12	+0.6
3,243,631	-		BWI76_RS15480	0.35	-3.9
3,243,646	-		BWI76_RS15480	0.37	+0.8
3,243,752	+		BWI76_RS15480	0.52	-1.9
3,243,776	-		BWI76_RS15480	0.56	+0.9
3,243,846	+		BWI76_RS15480	0.66	-2.9
3,243,846	+		BWI76_RS15480	0.66	+0.3
3,243,895	+		BWI76_RS15480	0.73	-2.1
3,243,895	+		BWI76_RS15480	0.73	-0.1
3,243,919	-		BWI76_RS15480	0.77	+0.2
3,243,926	-		BWI76_RS15480	0.78	-0.1
3,243,976	+		BWI76_RS15480	0.85	+1.6
3,243,978	-		BWI76_RS15480	0.85	-2.8
3,243,985	-		BWI76_RS15480	0.86	-1.1
3,243,985	-		BWI76_RS15480	0.86	+0.9
3,244,003	+		BWI76_RS15480	0.89	+0.9
3,244,011	-				-1.9
3,244,011	-				+0.9
3,244,011	-				+0.9
3,244,011	-				+0.7
3,244,094	+				-1.0
3,244,124	-				+0.5
3,244,212	-		BWI76_RS15485	0.19	-1.2
3,244,276	-		BWI76_RS15485	0.34	-1.7
3,244,320	-		BWI76_RS15485	0.44	-1.9
3,244,332	-		BWI76_RS15485	0.47	-0.6
3,244,338	+		BWI76_RS15485	0.48	-1.0
3,244,346	-		BWI76_RS15485	0.50	-1.5
3,244,346	-		BWI76_RS15485	0.50	-2.2
3,244,357	+		BWI76_RS15485	0.52	-1.1
3,244,382	-		BWI76_RS15485	0.58	-0.6
3,244,382	-		BWI76_RS15485	0.58	-0.4
3,244,439	+		BWI76_RS15485	0.71	+0.9
3,244,452	-		BWI76_RS15485	0.74	-3.4
3,244,452	-		BWI76_RS15485	0.74	-0.1
3,244,452	-		BWI76_RS15485	0.74	-0.1
3,244,452	-		BWI76_RS15485	0.74	-1.8
3,244,494	+		BWI76_RS15485	0.84	-0.1
3,244,520	-				+0.3
3,244,540	-				-0.7
3,244,540	-				-0.1
3,244,853	+				-0.1
3,244,853	+				+3.5
3,244,854	+				-3.7
3,244,861	-				-0.2
3,244,862	-				-2.5
3,244,873	+				-3.5
3,244,873	+				-1.5
3,244,873	+				+0.9
3,244,873	+				-2.8
3,244,881	-				+0.3
3,244,881	-				+0.7
3,244,881	-				-0.2
3,244,913	-				+0.9
3,244,935	+				+1.3
3,244,940	+				-1.9
3,244,945	+				+0.3
3,245,009	+		BWI76_RS15490	0.11	-0.5
3,245,047	-		BWI76_RS15490	0.14	+1.1
3,245,065	+		BWI76_RS15490	0.15	-2.9
3,245,440	+		BWI76_RS15490	0.41	-2.9