Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS12645

Experiment: RCH2_defined_noCarbon with Mixed culture; Ralstonia sp. UNC404CL21Col 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_noCarbon with Mixed culture; Ralstonia sp. UNC404CL21Col 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x
2,638,023	+				+0.9
2,638,094	-				+0.9
2,638,097	+				-1.9
2,638,173	+				-0.7
2,638,214	+				-1.1
2,638,214	+				+0.9
2,638,285	-		BWI76_RS12640	0.18	+0.6
2,638,337	+		BWI76_RS12640	0.26	+0.4
2,638,344	+		BWI76_RS12640	0.27	-1.1
2,638,352	-		BWI76_RS12640	0.28	-1.5
2,638,352	-		BWI76_RS12640	0.28	-1.5
2,638,352	-		BWI76_RS12640	0.28	-0.7
2,638,401	-		BWI76_RS12640	0.36	-2.5
2,638,423	+		BWI76_RS12640	0.40	-0.4
2,638,423	+		BWI76_RS12640	0.40	-1.7
2,638,436	+		BWI76_RS12640	0.42	-2.0
2,638,450	+		BWI76_RS12640	0.44	+0.9
2,638,458	-		BWI76_RS12640	0.45	-0.1
2,638,458	-				-0.7
2,638,546	-		BWI76_RS12640	0.59	-1.0
2,638,594	-		BWI76_RS12640	0.67	-3.5
2,638,638	-		BWI76_RS12640	0.74	-0.7
2,639,007	-		BWI76_RS12645	0.14	+0.1
2,639,008	-		BWI76_RS12645	0.14	+2.9
2,639,039	+		BWI76_RS12645	0.19	-2.8
2,639,045	+		BWI76_RS12645	0.20	+0.6
2,639,050	+		BWI76_RS12645	0.21	-1.0
2,639,089	+		BWI76_RS12645	0.28	+3.2
2,639,125	+		BWI76_RS12645	0.34	+0.5
2,639,185	+		BWI76_RS12645	0.44	+1.6
2,639,244	+		BWI76_RS12645	0.54	+2.4
2,639,244	+		BWI76_RS12645	0.54	+1.1
2,639,244	+		BWI76_RS12645	0.54	-0.1
2,639,244	+		BWI76_RS12645	0.54	+0.1
2,639,244	+		BWI76_RS12645	0.54	+2.9
2,639,252	-		BWI76_RS12645	0.56	-0.1
2,639,252	-		BWI76_RS12645	0.56	+0.9
2,639,252	-		BWI76_RS12645	0.56	+1.6
2,639,252	-		BWI76_RS12645	0.56	+0.1
2,639,252	-		BWI76_RS12645	0.56	+1.2
2,639,252	-		BWI76_RS12645	0.56	+0.0
2,639,285	+		BWI76_RS12645	0.61	+1.3
2,639,290	+		BWI76_RS12645	0.62	+0.7
2,639,320	-		BWI76_RS12645	0.67	+1.2
2,639,367	+		BWI76_RS12645	0.75	-3.2
2,639,403	+		BWI76_RS12645	0.82	-0.1
2,639,403	-		BWI76_RS12645	0.82	+0.6
2,639,419	+		BWI76_RS12645	0.84	+0.3
2,639,450	+		BWI76_RS12645	0.90	-0.7
2,639,458	-				+0.9
2,639,468	+				-0.1
2,639,472	+				+1.4
2,639,480	-				+2.4
2,639,482	+				-1.6
2,639,565	+				-2.5
2,639,578	-				-3.4
2,639,598	-				-1.1
2,639,664	+				-0.7
2,639,740	+				-0.1
2,639,743	-				-0.1
2,639,745	+				-2.8
2,639,761	+				-0.3
2,639,828	-		BWI76_RS12650	0.21	-0.7
2,639,916	+		BWI76_RS12650	0.37	-0.2
2,639,924	+		BWI76_RS12650	0.38	+0.5
2,639,924	+		BWI76_RS12650	0.38	-1.4
2,639,925	+		BWI76_RS12650	0.38	+1.4
2,639,925	+		BWI76_RS12650	0.38	-2.1
2,639,925	+		BWI76_RS12650	0.38	-1.7
2,639,943	+		BWI76_RS12650	0.41	+2.4
2,639,953	+		BWI76_RS12650	0.43	+0.7
2,640,187	+		BWI76_RS12650	0.85	-0.7
2,640,210	+		BWI76_RS12650	0.89	-0.5
2,640,220	+				-0.2
2,640,226	+				+0.9
2,640,227	+				+0.9
2,640,249	+				+0.8
2,640,280	+				-1.3
2,640,349	-				-0.4
2,640,352	+				-0.5
2,640,360	-		BWI76_RS12655	0.10	+0.5
2,640,369	-		BWI76_RS12655	0.13	+0.1
2,640,394	-		BWI76_RS12655	0.21	+0.9
2,640,410	+		BWI76_RS12655	0.27	-0.5
2,640,410	+		BWI76_RS12655	0.27	-1.4
2,640,410	+		BWI76_RS12655	0.27	-0.7
2,640,410	+		BWI76_RS12655	0.27	-0.2
2,640,418	+		BWI76_RS12655	0.29	+0.5
2,640,418	-		BWI76_RS12655	0.29	-2.5
2,640,418	-		BWI76_RS12655	0.29	-2.5
2,640,418	-		BWI76_RS12655	0.29	-0.0
2,640,418	-		BWI76_RS12655	0.29	+0.9
2,640,418	-		BWI76_RS12655	0.29	-0.7
2,640,418	-		BWI76_RS12655	0.29	-0.1
2,640,418	-		BWI76_RS12655	0.29	+0.5
2,640,418	-		BWI76_RS12655	0.29	-2.0
2,640,418	-		BWI76_RS12655	0.29	+1.2
2,640,418	-				+2.1
2,640,418	-		BWI76_RS12655	0.29	-0.7
2,640,418	-		BWI76_RS12655	0.29	-1.5
2,640,418	-		BWI76_RS12655	0.29	+1.9
2,640,425	-		BWI76_RS12655	0.32	-0.7
2,640,427	-		BWI76_RS12655	0.32	+0.4
2,640,447	+		BWI76_RS12655	0.39	-1.7
2,640,450	-				+0.9
2,640,455	-		BWI76_RS12655	0.42	+0.6
2,640,455	-		BWI76_RS12655	0.42	-0.7
2,640,455	-		BWI76_RS12655	0.42	-2.5
2,640,455	-		BWI76_RS12655	0.42	-3.4
2,640,455	-		BWI76_RS12655	0.42	-0.7