Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS11750

Experiment: RCH2_defined_noCarbon with Mixed culture; Ralstonia sp. UNC404CL21Col 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS11745 and BWI76_RS11750 are separated by 12 nucleotidesBWI76_RS11750 and BWI76_RS11755 are separated by 40 nucleotides BWI76_RS11745: BWI76_RS11745 - 6-phospho-beta-glucosidase, at 2,470,400 to 2,471,746 _RS11745 BWI76_RS11750: BWI76_RS11750 - chitooligosaccharide deacetylase, at 2,471,759 to 2,472,517 _RS11750 BWI76_RS11755: BWI76_RS11755 - catalase HPII, at 2,472,558 to 2,474,816 _RS11755 Position (kb) 2471 2472 2473Strain fitness (log2 ratio) -1 0 1 2at 2470.764 kb on - strand, within BWI76_RS11745at 2470.874 kb on + strand, within BWI76_RS11745at 2470.986 kb on - strand, within BWI76_RS11745at 2471.070 kb on + strand, within BWI76_RS11745at 2471.135 kb on + strand, within BWI76_RS11745at 2471.287 kb on + strand, within BWI76_RS11745at 2471.361 kb on + strand, within BWI76_RS11745at 2471.580 kb on + strand, within BWI76_RS11745at 2471.691 kb on + strandat 2471.713 kb on - strandat 2471.784 kb on - strandat 2471.861 kb on - strand, within BWI76_RS11750at 2472.165 kb on - strand, within BWI76_RS11750at 2472.333 kb on + strand, within BWI76_RS11750at 2472.443 kb on - strandat 2472.520 kb on - strandat 2472.994 kb on + strand, within BWI76_RS11755at 2473.066 kb on + strand, within BWI76_RS11755at 2473.110 kb on - strand, within BWI76_RS11755at 2473.303 kb on + strand, within BWI76_RS11755at 2473.370 kb on + strand, within BWI76_RS11755at 2473.437 kb on - strand, within BWI76_RS11755

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Per-strain Table

Position Strand Gene LocusTag Fraction RCH2_defined_noCarbon with Mixed culture; Ralstonia sp. UNC404CL21Col 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x
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2,470,764 - BWI76_RS11745 0.27 +1.3
2,470,874 + BWI76_RS11745 0.35 +0.9
2,470,986 - BWI76_RS11745 0.44 +2.7
2,471,070 + BWI76_RS11745 0.50 +0.4
2,471,135 + BWI76_RS11745 0.55 -0.4
2,471,287 + BWI76_RS11745 0.66 -1.4
2,471,361 + BWI76_RS11745 0.71 +1.3
2,471,580 + BWI76_RS11745 0.88 +0.7
2,471,691 + +0.5
2,471,713 - +0.2
2,471,784 - +1.1
2,471,861 - BWI76_RS11750 0.13 +1.7
2,472,165 - BWI76_RS11750 0.53 +0.9
2,472,333 + BWI76_RS11750 0.76 +0.7
2,472,443 - -0.2
2,472,520 - +0.0
2,472,994 + BWI76_RS11755 0.19 +0.8
2,473,066 + BWI76_RS11755 0.22 +0.2
2,473,110 - BWI76_RS11755 0.24 +0.7
2,473,303 + BWI76_RS11755 0.33 -0.7
2,473,370 + BWI76_RS11755 0.36 +0.8
2,473,437 - BWI76_RS11755 0.39 -0.5

Or see this region's nucleotide sequence