Experiment: palatinose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa1322 and SMa1323 are separated by 96 nucleotides SMa1323 and SMa1325 are separated by 260 nucleotides SMa1325 and SMa1326 are separated by 73 nucleotides SMa1326 and SMa1327 are separated by 49 nucleotides
SMa1322: SMa1322 - hypothetical protein, at 720,821 to 721,339
SMa1322
SMa1323: SMa1323 - Transcription regulator, at 721,436 to 721,804
SMa1323
SMa1325: SMa1325 - hypothetical protein, at 722,065 to 722,316
SMa1325
SMa1326: SMa1326 - hypothetical protein, at 722,390 to 723,037
SMa1326
SMa1327: SMa1327 - hydrolase, at 723,087 to 723,935
SMa1327
Position (kb)
722
723 Strain fitness (log2 ratio)
-1
0
1
2 at 721.080 kb on + strand, within SMa1322 at 721.081 kb on - strand, within SMa1322 at 721.081 kb on - strand, within SMa1322 at 721.083 kb on + strand, within SMa1322 at 721.093 kb on - strand, within SMa1322 at 721.234 kb on + strand, within SMa1322 at 721.268 kb on - strand, within SMa1322 at 721.284 kb on + strand, within SMa1322 at 721.285 kb on - strand, within SMa1322 at 721.295 kb on + strand at 721.296 kb on - strand at 721.474 kb on - strand, within SMa1323 at 721.572 kb on - strand, within SMa1323 at 721.687 kb on + strand, within SMa1323 at 721.687 kb on + strand, within SMa1323 at 721.768 kb on - strand at 721.823 kb on - strand at 721.918 kb on + strand at 721.918 kb on + strand at 721.918 kb on + strand at 721.919 kb on - strand at 721.922 kb on - strand at 722.206 kb on + strand, within SMa1325 at 722.253 kb on - strand, within SMa1325 at 722.299 kb on + strand at 722.300 kb on - strand at 722.300 kb on - strand at 722.300 kb on - strand at 722.300 kb on - strand at 722.300 kb on - strand at 722.324 kb on + strand at 722.325 kb on - strand at 722.335 kb on + strand at 722.336 kb on - strand at 722.336 kb on - strand at 722.363 kb on + strand at 722.364 kb on - strand at 722.378 kb on + strand at 722.439 kb on + strand at 722.439 kb on + strand at 722.527 kb on + strand, within SMa1326 at 722.527 kb on + strand, within SMa1326 at 722.540 kb on + strand, within SMa1326 at 722.541 kb on - strand, within SMa1326 at 722.830 kb on + strand, within SMa1326 at 722.831 kb on - strand, within SMa1326 at 723.022 kb on + strand at 723.040 kb on + strand at 723.040 kb on + strand at 723.040 kb on + strand at 723.040 kb on + strand at 723.040 kb on + strand at 723.041 kb on - strand at 723.041 kb on - strand at 723.041 kb on - strand at 723.041 kb on - strand at 723.041 kb on - strand at 723.041 kb on - strand at 723.131 kb on + strand at 723.132 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction palatinose (C) remove 721,080 + SMa1322 0.50 +0.0 721,081 - SMa1322 0.50 -0.8 721,081 - SMa1322 0.50 -1.2 721,083 + SMa1322 0.50 -0.2 721,093 - SMa1322 0.52 +0.1 721,234 + SMa1322 0.80 +1.8 721,268 - SMa1322 0.86 -0.4 721,284 + SMa1322 0.89 +0.0 721,285 - SMa1322 0.89 -0.3 721,295 + -0.6 721,296 - +1.3 721,474 - SMa1323 0.10 -0.3 721,572 - SMa1323 0.37 -0.3 721,687 + SMa1323 0.68 +1.0 721,687 + SMa1323 0.68 -1.1 721,768 - +0.5 721,823 - +0.4 721,918 + +0.6 721,918 + -0.5 721,918 + -0.9 721,919 - +0.1 721,922 - +0.3 722,206 + SMa1325 0.56 -0.8 722,253 - SMa1325 0.75 -0.2 722,299 + -0.3 722,300 - -0.9 722,300 - +1.4 722,300 - +0.2 722,300 - -1.6 722,300 - -0.5 722,324 + -0.5 722,325 - +0.1 722,335 + +1.3 722,336 - +0.1 722,336 - -0.4 722,363 + -0.3 722,364 - -0.1 722,378 + -0.9 722,439 + +0.4 722,439 + -0.1 722,527 + SMa1326 0.21 +0.0 722,527 + SMa1326 0.21 -0.4 722,540 + SMa1326 0.23 -0.6 722,541 - SMa1326 0.23 +0.2 722,830 + SMa1326 0.68 +0.0 722,831 - SMa1326 0.68 -0.4 723,022 + +0.4 723,040 + +0.1 723,040 + +0.0 723,040 + -0.1 723,040 + -0.9 723,040 + -0.6 723,041 - +0.0 723,041 - +0.6 723,041 - +0.2 723,041 - -0.6 723,041 - -0.4 723,041 - +0.2 723,131 + -0.7 723,132 - +0.8
Or see this region's nucleotide sequence