Experiment: palatinose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21583 and SM_b21584 are separated by 39 nucleotides SM_b21584 and SM_b21585 overlap by 4 nucleotides SM_b21585 and SM_b21586 are separated by 14 nucleotides
SM_b21583: SM_b21583 - hypothetical protein, at 1,122,540 to 1,122,902
_b21583
SM_b21584: SM_b21584 - hypothetical protein, at 1,122,942 to 1,123,799
_b21584
SM_b21585: SM_b21585 - hypothetical protein, at 1,123,796 to 1,125,682
_b21585
SM_b21586: SM_b21586 - glutathione synthetase, at 1,125,697 to 1,126,743
_b21586
Position (kb)
1123
1124
1125
1126 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1122.937 kb on - strand at 1123.046 kb on + strand, within SM_b21584 at 1123.249 kb on - strand, within SM_b21584 at 1123.249 kb on - strand, within SM_b21584 at 1123.283 kb on - strand, within SM_b21584 at 1123.283 kb on - strand, within SM_b21584 at 1123.341 kb on + strand at 1123.341 kb on + strand, within SM_b21584 at 1123.341 kb on + strand, within SM_b21584 at 1123.341 kb on + strand, within SM_b21584 at 1123.344 kb on + strand, within SM_b21584 at 1123.345 kb on - strand, within SM_b21584 at 1123.420 kb on - strand, within SM_b21584 at 1123.420 kb on - strand, within SM_b21584 at 1123.732 kb on + strand at 1123.733 kb on - strand at 1123.773 kb on - strand at 1123.951 kb on - strand at 1124.047 kb on + strand, within SM_b21585 at 1124.201 kb on - strand, within SM_b21585 at 1124.599 kb on - strand, within SM_b21585 at 1124.748 kb on - strand, within SM_b21585 at 1124.756 kb on + strand, within SM_b21585 at 1124.757 kb on - strand, within SM_b21585 at 1124.757 kb on - strand, within SM_b21585 at 1124.847 kb on - strand, within SM_b21585 at 1124.847 kb on - strand, within SM_b21585 at 1124.847 kb on - strand, within SM_b21585 at 1125.162 kb on - strand, within SM_b21585 at 1125.162 kb on - strand, within SM_b21585 at 1125.670 kb on + strand at 1125.670 kb on + strand at 1125.671 kb on - strand at 1125.671 kb on - strand at 1125.671 kb on - strand at 1125.683 kb on + strand at 1125.683 kb on + strand at 1125.684 kb on - strand at 1125.742 kb on + strand at 1125.743 kb on - strand at 1125.745 kb on + strand at 1125.747 kb on + strand at 1125.748 kb on - strand at 1125.748 kb on - strand at 1125.748 kb on - strand at 1125.748 kb on - strand at 1125.799 kb on + strand at 1125.800 kb on - strand at 1125.800 kb on - strand at 1125.800 kb on - strand at 1125.800 kb on - strand at 1125.800 kb on - strand at 1125.871 kb on - strand, within SM_b21586 at 1125.871 kb on - strand, within SM_b21586 at 1125.954 kb on - strand, within SM_b21586 at 1125.954 kb on - strand, within SM_b21586 at 1125.954 kb on - strand, within SM_b21586 at 1126.016 kb on - strand, within SM_b21586 at 1126.016 kb on - strand, within SM_b21586 at 1126.068 kb on - strand, within SM_b21586 at 1126.108 kb on + strand, within SM_b21586 at 1126.108 kb on + strand, within SM_b21586 at 1126.109 kb on - strand, within SM_b21586 at 1126.313 kb on - strand, within SM_b21586 at 1126.330 kb on + strand, within SM_b21586 at 1126.502 kb on + strand, within SM_b21586 at 1126.502 kb on + strand, within SM_b21586 at 1126.503 kb on - strand, within SM_b21586 at 1126.567 kb on - strand, within SM_b21586 at 1126.567 kb on - strand, within SM_b21586 at 1126.568 kb on + strand, within SM_b21586 at 1126.568 kb on + strand, within SM_b21586 at 1126.568 kb on + strand, within SM_b21586 at 1126.568 kb on + strand, within SM_b21586
Per-strain Table
Position Strand Gene LocusTag Fraction palatinose (C) remove 1,122,937 - -0.1 1,123,046 + SM_b21584 0.12 +0.7 1,123,249 - SM_b21584 0.36 +0.3 1,123,249 - SM_b21584 0.36 -0.0 1,123,283 - SM_b21584 0.40 +0.2 1,123,283 - SM_b21584 0.40 -0.5 1,123,341 + -1.2 1,123,341 + SM_b21584 0.47 +0.2 1,123,341 + SM_b21584 0.47 +0.4 1,123,341 + SM_b21584 0.47 -0.4 1,123,344 + SM_b21584 0.47 +0.4 1,123,345 - SM_b21584 0.47 +0.2 1,123,420 - SM_b21584 0.56 -0.3 1,123,420 - SM_b21584 0.56 +0.5 1,123,732 + -0.4 1,123,733 - -0.3 1,123,773 - -0.7 1,123,951 - -0.2 1,124,047 + SM_b21585 0.13 +0.3 1,124,201 - SM_b21585 0.21 -0.2 1,124,599 - SM_b21585 0.43 -1.1 1,124,748 - SM_b21585 0.50 +0.4 1,124,756 + SM_b21585 0.51 +0.1 1,124,757 - SM_b21585 0.51 +0.9 1,124,757 - SM_b21585 0.51 +0.4 1,124,847 - SM_b21585 0.56 +0.4 1,124,847 - SM_b21585 0.56 +0.3 1,124,847 - SM_b21585 0.56 +0.8 1,125,162 - SM_b21585 0.72 +0.1 1,125,162 - SM_b21585 0.72 +1.2 1,125,670 + +0.7 1,125,670 + -0.3 1,125,671 - -0.1 1,125,671 - +0.1 1,125,671 - -0.5 1,125,683 + +0.3 1,125,683 + -0.5 1,125,684 - +1.0 1,125,742 + -0.7 1,125,743 - -1.1 1,125,745 + +0.4 1,125,747 + -1.6 1,125,748 - -0.7 1,125,748 - -0.1 1,125,748 - +0.1 1,125,748 - +0.2 1,125,799 + -0.0 1,125,800 - -0.1 1,125,800 - +0.5 1,125,800 - +0.6 1,125,800 - -0.1 1,125,800 - -0.1 1,125,871 - SM_b21586 0.17 -0.5 1,125,871 - SM_b21586 0.17 +0.6 1,125,954 - SM_b21586 0.25 -0.2 1,125,954 - SM_b21586 0.25 -0.1 1,125,954 - SM_b21586 0.25 -0.3 1,126,016 - SM_b21586 0.30 +0.2 1,126,016 - SM_b21586 0.30 -0.3 1,126,068 - SM_b21586 0.35 +0.2 1,126,108 + SM_b21586 0.39 -0.1 1,126,108 + SM_b21586 0.39 -1.2 1,126,109 - SM_b21586 0.39 +1.1 1,126,313 - SM_b21586 0.59 -0.3 1,126,330 + SM_b21586 0.60 -0.2 1,126,502 + SM_b21586 0.77 +0.8 1,126,502 + SM_b21586 0.77 +0.1 1,126,503 - SM_b21586 0.77 +0.6 1,126,567 - SM_b21586 0.83 -0.8 1,126,567 - SM_b21586 0.83 +0.1 1,126,568 + SM_b21586 0.83 +0.3 1,126,568 + SM_b21586 0.83 -0.4 1,126,568 + SM_b21586 0.83 +1.9 1,126,568 + SM_b21586 0.83 -2.1
Or see this region's nucleotide sequence