Experiment: RCH2_defined_noCarbon with Glu_DLac_Acetate_mix 1 x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS25315 and BWI76_RS25320 are separated by 9 nucleotides BWI76_RS25320 and BWI76_RS25325 are separated by 79 nucleotides BWI76_RS25325 and BWI76_RS25330 are separated by 92 nucleotides
BWI76_RS25315: BWI76_RS25315 - glutamate synthase large subunit, at 5,261,068 to 5,265,528
_RS25315
BWI76_RS25320: BWI76_RS25320 - glutamate synthase, at 5,265,538 to 5,266,956
_RS25320
BWI76_RS25325: BWI76_RS25325 - hypothetical protein, at 5,267,036 to 5,267,443
_RS25325
BWI76_RS25330: BWI76_RS25330 - stringent starvation protein B, at 5,267,536 to 5,268,024
_RS25330
Position (kb) 5265
5266
5267 Strain fitness (log2 ratio) -2
-1
0
1 at 5264.659 kb on + strand, within BWI76_RS25315 at 5264.672 kb on - strand, within BWI76_RS25315 at 5264.763 kb on - strand, within BWI76_RS25315 at 5264.768 kb on + strand, within BWI76_RS25315 at 5264.919 kb on - strand, within BWI76_RS25315 at 5265.056 kb on - strand, within BWI76_RS25315 at 5265.502 kb on + strand at 5265.748 kb on - strand, within BWI76_RS25320 at 5265.967 kb on - strand, within BWI76_RS25320 at 5266.009 kb on + strand, within BWI76_RS25320 at 5266.228 kb on + strand, within BWI76_RS25320 at 5266.268 kb on - strand, within BWI76_RS25320 at 5266.308 kb on + strand, within BWI76_RS25320 at 5266.432 kb on + strand, within BWI76_RS25320 at 5266.432 kb on + strand, within BWI76_RS25320 at 5266.561 kb on - strand, within BWI76_RS25320 at 5266.611 kb on + strand, within BWI76_RS25320 at 5266.691 kb on + strand, within BWI76_RS25320 at 5267.041 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_noCarbon with Glu_DLac_Acetate_mix 1 x remove 5,264,659 + BWI76_RS25315 0.80 -2.1 5,264,672 - BWI76_RS25315 0.81 -2.0 5,264,763 - BWI76_RS25315 0.83 -1.0 5,264,768 + BWI76_RS25315 0.83 -1.5 5,264,919 - BWI76_RS25315 0.86 -1.9 5,265,056 - BWI76_RS25315 0.89 -2.7 5,265,502 + +1.4 5,265,748 - BWI76_RS25320 0.15 -0.9 5,265,967 - BWI76_RS25320 0.30 -0.0 5,266,009 + BWI76_RS25320 0.33 -2.4 5,266,228 + BWI76_RS25320 0.49 -2.1 5,266,268 - BWI76_RS25320 0.51 -0.0 5,266,308 + BWI76_RS25320 0.54 -0.4 5,266,432 + BWI76_RS25320 0.63 -2.0 5,266,432 + BWI76_RS25320 0.63 -1.6 5,266,561 - BWI76_RS25320 0.72 -1.8 5,266,611 + BWI76_RS25320 0.76 -1.4 5,266,691 + BWI76_RS25320 0.81 -2.3 5,267,041 - -0.2
Or see this region's nucleotide sequence