Experiment: RCH2_defined_noCarbon with Glu_DLac_Acetate_mix 1 x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS21670 and BWI76_RS21675 are separated by 13 nucleotides BWI76_RS21675 and BWI76_RS21680 are separated by 22 nucleotides BWI76_RS21680 and BWI76_RS21685 are separated by 49 nucleotides BWI76_RS21685 and BWI76_RS21690 are separated by 79 nucleotides BWI76_RS21690 and BWI76_RS21695 are separated by 138 nucleotides
BWI76_RS21670: BWI76_RS21670 - hypothetical protein, at 4,534,896 to 4,535,378
_RS21670
BWI76_RS21675: BWI76_RS21675 - hypothetical protein, at 4,535,392 to 4,535,613
_RS21675
BWI76_RS21680: BWI76_RS21680 - antitoxin of the YeeV-YeeU toxin-antitoxin system, at 4,535,636 to 4,535,995
_RS21680
BWI76_RS21685: BWI76_RS21685 - hypothetical protein, at 4,536,045 to 4,536,419
_RS21685
BWI76_RS21690: BWI76_RS21690 - hypothetical protein, at 4,536,499 to 4,536,819
_RS21690
BWI76_RS21695: BWI76_RS21695 - glycosyl transferase family protein, at 4,536,958 to 4,537,947
_RS21695
Position (kb) 4536
4537 Strain fitness (log2 ratio) -1
0
1 at 4535.460 kb on + strand, within BWI76_RS21675 at 4535.587 kb on + strand, within BWI76_RS21675 at 4535.602 kb on + strand at 4535.605 kb on - strand at 4535.882 kb on - strand, within BWI76_RS21680 at 4535.892 kb on + strand, within BWI76_RS21680 at 4535.928 kb on - strand, within BWI76_RS21680 at 4536.044 kb on - strand at 4536.268 kb on - strand, within BWI76_RS21685 at 4536.400 kb on + strand at 4536.401 kb on + strand at 4536.401 kb on + strand at 4536.525 kb on - strand at 4536.588 kb on + strand, within BWI76_RS21690 at 4536.620 kb on + strand, within BWI76_RS21690 at 4536.846 kb on - strand at 4537.078 kb on + strand, within BWI76_RS21695 at 4537.083 kb on + strand, within BWI76_RS21695
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_noCarbon with Glu_DLac_Acetate_mix 1 x remove 4,535,460 + BWI76_RS21675 0.31 +1.0 4,535,587 + BWI76_RS21675 0.88 +1.0 4,535,602 + -0.7 4,535,605 - -0.4 4,535,882 - BWI76_RS21680 0.68 -0.5 4,535,892 + BWI76_RS21680 0.71 +0.0 4,535,928 - BWI76_RS21680 0.81 -0.4 4,536,044 - +0.4 4,536,268 - BWI76_RS21685 0.59 -1.5 4,536,400 + +0.1 4,536,401 + -0.3 4,536,401 + +0.4 4,536,525 - +0.5 4,536,588 + BWI76_RS21690 0.28 -0.6 4,536,620 + BWI76_RS21690 0.38 -0.6 4,536,846 - -0.6 4,537,078 + BWI76_RS21695 0.12 -1.1 4,537,083 + BWI76_RS21695 0.13 -0.2
Or see this region's nucleotide sequence