Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS09870

Experiment: RCH2_defined_noCarbon with Glu_DLac_Acetate_mix 1 x

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS09860 and BWI76_RS09865 are separated by 13 nucleotidesBWI76_RS09865 and BWI76_RS09870 are separated by 60 nucleotidesBWI76_RS09870 and BWI76_RS09875 are separated by 187 nucleotides BWI76_RS09860: BWI76_RS09860 - hypothetical protein, at 2,071,543 to 2,072,094 _RS09860 BWI76_RS09865: BWI76_RS09865 - MBL fold hydrolase, at 2,072,108 to 2,072,755 _RS09865 BWI76_RS09870: BWI76_RS09870 - aromatic amino acid aminotransferase, at 2,072,816 to 2,074,006 _RS09870 BWI76_RS09875: BWI76_RS09875 - phosphoporin PhoE, at 2,074,194 to 2,075,273 _RS09875 Position (kb) 2072 2073 2074 2075Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 2071.818 kb on + strand, within BWI76_RS09860at 2071.818 kb on + strand, within BWI76_RS09860at 2071.826 kb on - strand, within BWI76_RS09860at 2071.826 kb on - strand, within BWI76_RS09860at 2072.025 kb on - strand, within BWI76_RS09860at 2072.244 kb on + strand, within BWI76_RS09865at 2072.262 kb on - strand, within BWI76_RS09865at 2072.312 kb on + strand, within BWI76_RS09865at 2072.317 kb on + strand, within BWI76_RS09865at 2072.317 kb on + strand, within BWI76_RS09865at 2072.317 kb on + strand, within BWI76_RS09865at 2072.325 kb on - strand, within BWI76_RS09865at 2073.464 kb on - strand, within BWI76_RS09870at 2073.577 kb on + strand, within BWI76_RS09870at 2073.605 kb on + strand, within BWI76_RS09870at 2073.769 kb on + strand, within BWI76_RS09870at 2073.866 kb on + strand, within BWI76_RS09870at 2073.874 kb on - strand, within BWI76_RS09870at 2073.874 kb on - strand, within BWI76_RS09870at 2073.874 kb on - strand, within BWI76_RS09870at 2073.879 kb on + strand, within BWI76_RS09870at 2073.995 kb on - strandat 2074.455 kb on - strand, within BWI76_RS09875at 2074.528 kb on + strand, within BWI76_RS09875at 2074.544 kb on - strand, within BWI76_RS09875at 2074.557 kb on - strand, within BWI76_RS09875at 2074.557 kb on - strand, within BWI76_RS09875at 2074.672 kb on - strand, within BWI76_RS09875at 2074.845 kb on - strand, within BWI76_RS09875at 2074.857 kb on + strand, within BWI76_RS09875at 2074.865 kb on - strand, within BWI76_RS09875

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Per-strain Table

Position Strand Gene LocusTag Fraction RCH2_defined_noCarbon with Glu_DLac_Acetate_mix 1 x
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2,071,818 + BWI76_RS09860 0.50 +0.1
2,071,818 + BWI76_RS09860 0.50 -0.6
2,071,826 - BWI76_RS09860 0.51 -0.7
2,071,826 - BWI76_RS09860 0.51 -1.4
2,072,025 - BWI76_RS09860 0.87 +0.9
2,072,244 + BWI76_RS09865 0.21 +0.3
2,072,262 - BWI76_RS09865 0.24 +3.2
2,072,312 + BWI76_RS09865 0.31 +0.6
2,072,317 + BWI76_RS09865 0.32 +0.4
2,072,317 + BWI76_RS09865 0.32 -0.1
2,072,317 + BWI76_RS09865 0.32 +0.5
2,072,325 - BWI76_RS09865 0.33 +1.6
2,073,464 - BWI76_RS09870 0.54 -3.1
2,073,577 + BWI76_RS09870 0.64 -2.1
2,073,605 + BWI76_RS09870 0.66 -1.5
2,073,769 + BWI76_RS09870 0.80 -2.5
2,073,866 + BWI76_RS09870 0.88 -3.2
2,073,874 - BWI76_RS09870 0.89 -0.1
2,073,874 - BWI76_RS09870 0.89 -0.2
2,073,874 - BWI76_RS09870 0.89 -0.5
2,073,879 + BWI76_RS09870 0.89 -1.7
2,073,995 - -0.1
2,074,455 - BWI76_RS09875 0.24 +0.2
2,074,528 + BWI76_RS09875 0.31 +0.1
2,074,544 - BWI76_RS09875 0.32 -0.7
2,074,557 - BWI76_RS09875 0.34 +0.3
2,074,557 - BWI76_RS09875 0.34 -0.6
2,074,672 - BWI76_RS09875 0.44 -1.0
2,074,845 - BWI76_RS09875 0.60 -0.1
2,074,857 + BWI76_RS09875 0.61 -0.7
2,074,865 - BWI76_RS09875 0.62 +0.5

Or see this region's nucleotide sequence