Experiment: RCH2_defined_noCarbon with Glu_DLac_Acetate_mix 1 x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS07425 and BWI76_RS07430 are separated by 681 nucleotides BWI76_RS07430 and BWI76_RS07435 are separated by 238 nucleotides
BWI76_RS07425: BWI76_RS07425 - transcriptional regulator, at 1,566,905 to 1,567,522
_RS07425
BWI76_RS07430: BWI76_RS07430 - NUDIX hydrolase, at 1,568,204 to 1,568,575
_RS07430
BWI76_RS07435: BWI76_RS07435 - LacI family transcriptional regulator, at 1,568,814 to 1,569,794
_RS07435
Position (kb)
1568
1569 Strain fitness (log2 ratio)
-2
-1
0
1 at 1567.204 kb on - strand, within BWI76_RS07425 at 1567.211 kb on - strand at 1567.213 kb on + strand, within BWI76_RS07425 at 1567.221 kb on - strand, within BWI76_RS07425 at 1567.259 kb on - strand, within BWI76_RS07425 at 1567.474 kb on + strand at 1567.474 kb on + strand at 1567.474 kb on + strand at 1567.474 kb on + strand at 1567.474 kb on + strand at 1567.482 kb on - strand at 1567.668 kb on + strand at 1567.676 kb on - strand at 1567.676 kb on - strand at 1567.753 kb on - strand at 1567.880 kb on - strand at 1567.888 kb on + strand at 1567.972 kb on + strand at 1567.984 kb on + strand at 1568.037 kb on + strand at 1568.090 kb on + strand at 1568.098 kb on - strand at 1568.099 kb on - strand at 1568.100 kb on + strand at 1568.103 kb on - strand at 1568.105 kb on + strand at 1568.202 kb on + strand at 1568.223 kb on + strand at 1568.278 kb on + strand, within BWI76_RS07430 at 1568.286 kb on - strand, within BWI76_RS07430 at 1568.322 kb on - strand, within BWI76_RS07430 at 1568.368 kb on + strand, within BWI76_RS07430 at 1568.370 kb on - strand, within BWI76_RS07430 at 1568.502 kb on + strand, within BWI76_RS07430 at 1568.510 kb on - strand, within BWI76_RS07430 at 1568.527 kb on - strand, within BWI76_RS07430 at 1568.606 kb on + strand at 1568.614 kb on - strand at 1568.614 kb on - strand at 1568.631 kb on - strand at 1568.659 kb on - strand at 1568.721 kb on - strand at 1568.848 kb on + strand at 1568.928 kb on + strand, within BWI76_RS07435 at 1569.108 kb on + strand, within BWI76_RS07435 at 1569.340 kb on - strand, within BWI76_RS07435 at 1569.502 kb on + strand, within BWI76_RS07435
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_noCarbon with Glu_DLac_Acetate_mix 1 x remove 1,567,204 - BWI76_RS07425 0.48 -2.1 1,567,211 - +0.9 1,567,213 + BWI76_RS07425 0.50 -0.3 1,567,221 - BWI76_RS07425 0.51 -0.7 1,567,259 - BWI76_RS07425 0.57 +0.1 1,567,474 + -0.5 1,567,474 + -0.3 1,567,474 + -0.4 1,567,474 + -1.2 1,567,474 + +1.1 1,567,482 - -0.6 1,567,668 + -0.1 1,567,676 - -0.8 1,567,676 - -0.1 1,567,753 - -0.7 1,567,880 - +0.6 1,567,888 + +0.3 1,567,972 + +1.7 1,567,984 + -0.6 1,568,037 + -0.3 1,568,090 + +0.3 1,568,098 - -0.7 1,568,099 - -0.4 1,568,100 + -1.1 1,568,103 - +0.0 1,568,105 + -0.1 1,568,202 + +0.6 1,568,223 + -1.4 1,568,278 + BWI76_RS07430 0.20 -1.2 1,568,286 - BWI76_RS07430 0.22 +0.5 1,568,322 - BWI76_RS07430 0.32 +0.1 1,568,368 + BWI76_RS07430 0.44 -1.3 1,568,370 - BWI76_RS07430 0.45 -1.2 1,568,502 + BWI76_RS07430 0.80 +0.0 1,568,510 - BWI76_RS07430 0.82 -0.1 1,568,527 - BWI76_RS07430 0.87 -1.4 1,568,606 + +0.3 1,568,614 - +0.2 1,568,614 - -0.4 1,568,631 - +0.2 1,568,659 - -0.1 1,568,721 - -0.3 1,568,848 + +0.6 1,568,928 + BWI76_RS07435 0.12 +0.7 1,569,108 + BWI76_RS07435 0.30 +0.2 1,569,340 - BWI76_RS07435 0.54 +0.9 1,569,502 + BWI76_RS07435 0.70 -0.9
Or see this region's nucleotide sequence