Experiment: Mannobiose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21153 and SM_b21154 are separated by 150 nucleotides SM_b21154 and SM_b21155 are separated by 80 nucleotides SM_b21155 and SM_b21156 are separated by 1 nucleotides SM_b21156 and SM_b21157 are separated by 42 nucleotides
SM_b21153: SM_b21153 - acetyltransferase, at 898,009 to 898,509
_b21153
SM_b21154: SM_b21154 - hypothetical protein, at 898,660 to 899,043
_b21154
SM_b21155: SM_b21155 - hypothetical protein, at 899,124 to 900,617
_b21155
SM_b21156: SM_b21156 - hypothetical protein, at 900,619 to 901,185
_b21156
SM_b21157: SM_b21157 - translation initiation inhibitor protein, at 901,228 to 901,617
_b21157
Position (kb)
899
900
901 Strain fitness (log2 ratio)
-1
0
1 at 898.270 kb on + strand, within SM_b21153 at 898.271 kb on - strand, within SM_b21153 at 898.687 kb on + strand at 898.687 kb on + strand at 898.687 kb on + strand at 898.687 kb on + strand at 898.687 kb on + strand at 898.688 kb on - strand at 898.688 kb on - strand at 898.688 kb on - strand at 898.688 kb on - strand at 898.688 kb on - strand at 898.688 kb on - strand at 899.015 kb on + strand at 899.015 kb on + strand at 899.015 kb on + strand at 899.116 kb on + strand at 899.117 kb on - strand at 899.239 kb on + strand at 899.240 kb on - strand at 899.687 kb on + strand, within SM_b21155 at 899.697 kb on - strand, within SM_b21155 at 899.776 kb on + strand, within SM_b21155 at 899.776 kb on + strand, within SM_b21155 at 899.776 kb on + strand, within SM_b21155 at 899.777 kb on - strand, within SM_b21155 at 900.006 kb on + strand, within SM_b21155 at 900.214 kb on - strand, within SM_b21155 at 900.358 kb on + strand, within SM_b21155 at 900.358 kb on + strand, within SM_b21155 at 900.359 kb on - strand, within SM_b21155 at 900.359 kb on - strand, within SM_b21155 at 900.537 kb on + strand at 900.537 kb on + strand at 900.538 kb on - strand at 900.546 kb on - strand at 900.695 kb on + strand, within SM_b21156 at 900.699 kb on - strand, within SM_b21156 at 900.897 kb on - strand, within SM_b21156 at 900.995 kb on - strand, within SM_b21156 at 901.054 kb on + strand, within SM_b21156 at 901.055 kb on - strand, within SM_b21156 at 901.430 kb on - strand, within SM_b21157 at 901.504 kb on + strand, within SM_b21157 at 901.505 kb on - strand, within SM_b21157 at 901.513 kb on + strand, within SM_b21157 at 901.513 kb on + strand, within SM_b21157 at 901.547 kb on + strand, within SM_b21157 at 901.548 kb on - strand, within SM_b21157 at 901.548 kb on - strand, within SM_b21157 at 901.548 kb on - strand, within SM_b21157 at 901.597 kb on + strand at 901.598 kb on - strand at 901.598 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Mannobiose (C) remove 898,270 + SM_b21153 0.52 -0.7 898,271 - SM_b21153 0.52 -0.3 898,687 + -1.7 898,687 + +0.9 898,687 + +0.4 898,687 + +0.5 898,687 + -1.0 898,688 - +0.5 898,688 - +0.2 898,688 - +1.0 898,688 - -0.2 898,688 - -0.2 898,688 - +0.3 899,015 + +0.4 899,015 + +0.9 899,015 + +0.6 899,116 + -0.1 899,117 - +0.5 899,239 + +0.1 899,240 - +0.5 899,687 + SM_b21155 0.38 -0.8 899,697 - SM_b21155 0.38 -0.9 899,776 + SM_b21155 0.44 +0.0 899,776 + SM_b21155 0.44 +0.2 899,776 + SM_b21155 0.44 +0.3 899,777 - SM_b21155 0.44 -0.2 900,006 + SM_b21155 0.59 -0.6 900,214 - SM_b21155 0.73 -0.7 900,358 + SM_b21155 0.83 -0.2 900,358 + SM_b21155 0.83 -1.3 900,359 - SM_b21155 0.83 -0.8 900,359 - SM_b21155 0.83 +0.2 900,537 + -0.4 900,537 + -0.3 900,538 - -0.3 900,546 - -0.2 900,695 + SM_b21156 0.13 +1.3 900,699 - SM_b21156 0.14 -0.1 900,897 - SM_b21156 0.49 -0.3 900,995 - SM_b21156 0.66 +0.8 901,054 + SM_b21156 0.77 -0.0 901,055 - SM_b21156 0.77 +0.0 901,430 - SM_b21157 0.52 +0.4 901,504 + SM_b21157 0.71 -0.3 901,505 - SM_b21157 0.71 +0.2 901,513 + SM_b21157 0.73 -0.2 901,513 + SM_b21157 0.73 +0.5 901,547 + SM_b21157 0.82 -0.6 901,548 - SM_b21157 0.82 -0.2 901,548 - SM_b21157 0.82 -0.1 901,548 - SM_b21157 0.82 -0.3 901,597 + +0.1 901,598 - -0.0 901,598 - -0.3
Or see this region's nucleotide sequence