Experiment: RCH2_defined_noCarbon with Mixed culture; Arthrobacter sp. AnTP99 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS27065 and BWI76_RS27070 are separated by 101 nucleotides BWI76_RS27070 and BWI76_RS27075 are separated by 118 nucleotides
BWI76_RS27065: BWI76_RS27065 - valine--pyruvate transaminase, at 5,616,666 to 5,617,925
_RS27065
BWI76_RS27070: BWI76_RS27070 - 4Fe-4S ferredoxin, at 5,618,027 to 5,618,515
_RS27070
BWI76_RS27075: BWI76_RS27075 - IclR family transcriptional regulator, at 5,618,634 to 5,619,452
_RS27075
Position (kb)
5618
5619 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 5617.140 kb on - strand, within BWI76_RS27065 at 5617.234 kb on + strand, within BWI76_RS27065 at 5617.350 kb on + strand, within BWI76_RS27065 at 5617.506 kb on - strand, within BWI76_RS27065 at 5617.524 kb on + strand, within BWI76_RS27065 at 5617.575 kb on - strand, within BWI76_RS27065 at 5617.696 kb on + strand, within BWI76_RS27065 at 5617.697 kb on + strand, within BWI76_RS27065 at 5617.705 kb on - strand, within BWI76_RS27065 at 5617.763 kb on - strand, within BWI76_RS27065 at 5617.903 kb on + strand at 5617.913 kb on + strand at 5617.969 kb on - strand at 5618.091 kb on + strand, within BWI76_RS27070 at 5618.104 kb on - strand at 5618.185 kb on + strand, within BWI76_RS27070 at 5618.224 kb on + strand, within BWI76_RS27070 at 5618.234 kb on - strand, within BWI76_RS27070 at 5618.255 kb on + strand, within BWI76_RS27070 at 5618.413 kb on + strand, within BWI76_RS27070 at 5618.413 kb on + strand, within BWI76_RS27070 at 5618.421 kb on - strand, within BWI76_RS27070 at 5618.423 kb on + strand, within BWI76_RS27070 at 5618.431 kb on - strand, within BWI76_RS27070 at 5618.431 kb on - strand, within BWI76_RS27070 at 5618.431 kb on - strand, within BWI76_RS27070 at 5618.638 kb on + strand at 5618.800 kb on + strand, within BWI76_RS27075 at 5618.906 kb on - strand, within BWI76_RS27075 at 5618.995 kb on + strand, within BWI76_RS27075 at 5619.003 kb on + strand, within BWI76_RS27075 at 5619.100 kb on - strand, within BWI76_RS27075 at 5619.196 kb on - strand, within BWI76_RS27075 at 5619.264 kb on + strand, within BWI76_RS27075 at 5619.392 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_noCarbon with Mixed culture; Arthrobacter sp. AnTP99 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x remove 5,617,140 - BWI76_RS27065 0.38 +0.4 5,617,234 + BWI76_RS27065 0.45 -0.5 5,617,350 + BWI76_RS27065 0.54 -0.8 5,617,506 - BWI76_RS27065 0.67 +0.1 5,617,524 + BWI76_RS27065 0.68 +1.1 5,617,575 - BWI76_RS27065 0.72 -0.4 5,617,696 + BWI76_RS27065 0.82 -0.5 5,617,697 + BWI76_RS27065 0.82 -0.3 5,617,705 - BWI76_RS27065 0.82 +0.6 5,617,763 - BWI76_RS27065 0.87 +2.1 5,617,903 + +1.3 5,617,913 + -0.1 5,617,969 - +0.5 5,618,091 + BWI76_RS27070 0.13 -0.5 5,618,104 - +1.1 5,618,185 + BWI76_RS27070 0.32 +0.3 5,618,224 + BWI76_RS27070 0.40 -0.4 5,618,234 - BWI76_RS27070 0.42 -2.4 5,618,255 + BWI76_RS27070 0.47 -0.0 5,618,413 + BWI76_RS27070 0.79 -1.1 5,618,413 + BWI76_RS27070 0.79 -2.3 5,618,421 - BWI76_RS27070 0.81 +0.4 5,618,423 + BWI76_RS27070 0.81 +2.1 5,618,431 - BWI76_RS27070 0.83 -0.6 5,618,431 - BWI76_RS27070 0.83 -0.2 5,618,431 - BWI76_RS27070 0.83 -1.7 5,618,638 + +0.1 5,618,800 + BWI76_RS27075 0.20 -0.2 5,618,906 - BWI76_RS27075 0.33 -0.8 5,618,995 + BWI76_RS27075 0.44 -0.9 5,619,003 + BWI76_RS27075 0.45 -1.6 5,619,100 - BWI76_RS27075 0.57 -0.5 5,619,196 - BWI76_RS27075 0.69 -2.1 5,619,264 + BWI76_RS27075 0.77 +0.1 5,619,392 + +0.6
Or see this region's nucleotide sequence