Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS23490

Experiment: RCH2_defined_noCarbon with Mixed culture; Arthrobacter sp. AnTP99 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_noCarbon with Mixed culture; Arthrobacter sp. AnTP99 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x
4,899,278	+		BWI76_RS23480	0.77	+1.2
4,899,278	+		BWI76_RS23480	0.77	-1.6
4,899,283	+		BWI76_RS23480	0.78	-1.2
4,899,283	+		BWI76_RS23480	0.78	-1.2
4,899,284	-		BWI76_RS23480	0.78	-2.4
4,899,291	-		BWI76_RS23480	0.79	-1.9
4,899,299	+		BWI76_RS23480	0.80	-3.1
4,899,310	-		BWI76_RS23480	0.82	-3.0
4,899,336	+		BWI76_RS23480	0.85	-3.2
4,899,339	+		BWI76_RS23480	0.86	-1.9
4,899,339	+		BWI76_RS23480	0.86	-1.9
4,899,339	+		BWI76_RS23480	0.86	-0.7
4,899,347	-		BWI76_RS23480	0.87	-0.9
4,899,347	-		BWI76_RS23480	0.87	-1.8
4,899,347	-		BWI76_RS23480	0.87	-1.4
4,899,348	+		BWI76_RS23480	0.87	-1.7
4,899,350	+		BWI76_RS23480	0.87	-2.3
4,899,350	+		BWI76_RS23480	0.87	-2.0
4,899,356	-		BWI76_RS23480	0.88	-1.5
4,899,357	-		BWI76_RS23480	0.88	-1.8
4,899,358	-		BWI76_RS23480	0.88	-1.2
4,899,358	-		BWI76_RS23480	0.88	-0.7
4,899,371	-				-2.0
4,899,375	+				-1.0
4,899,388	+				-1.0
4,899,394	-				-1.5
4,899,394	-				-3.9
4,899,398	+				-0.5
4,899,399	-				-0.7
4,899,403	+				-1.8
4,899,403	+				-0.6
4,899,403	+				-1.4
4,899,406	+				+0.2
4,899,408	+				-0.9
4,899,411	-				-1.9
4,899,411	-				-3.2
4,899,416	+				-0.8
4,899,416	+				-1.2
4,899,416	+				-1.0
4,899,416	+				-0.7
4,899,416	+				-0.7
4,899,416	+				-1.5
4,899,416	+				-1.3
4,899,416	+				-1.5
4,899,424	-				-1.3
4,899,424	-				-0.8
4,899,424	-				-2.0
4,899,474	+				-0.7
4,899,486	+				-0.7
4,899,494	-				-0.7
4,899,494	-				-0.1
4,899,494	-				-0.1
4,899,496	-				-0.7
4,899,502	-				-0.1
4,899,512	+				-2.9
4,899,520	-				+0.8
4,899,531	+				-0.1
4,899,531	+				-0.1
4,899,531	+				+0.4
4,899,531	+				+0.9
4,899,531	+				+0.4
4,899,531	+				-1.2
4,899,536	+				-1.2
4,899,539	-				+0.1
4,899,539	-				-0.1
4,899,539	-				-0.0
4,899,539	-				+0.1
4,899,539	-				+1.0
4,899,539	-				-0.7
4,899,539	-				-0.9
4,899,565	+		BWI76_RS23485	0.10	+0.2
4,899,565	+		BWI76_RS23485	0.10	+1.2
4,899,565	+		BWI76_RS23485	0.10	-0.7
4,899,565	+		BWI76_RS23485	0.10	+0.9
4,899,566	+		BWI76_RS23485	0.10	-0.9
4,899,566	+		BWI76_RS23485	0.10	+0.9
4,899,573	-		BWI76_RS23485	0.12	-0.2
4,899,573	-		BWI76_RS23485	0.12	+0.1
4,899,573	-		BWI76_RS23485	0.12	-0.8
4,899,573	-		BWI76_RS23485	0.12	-0.2
4,899,573	-		BWI76_RS23485	0.12	-0.5
4,899,573	-		BWI76_RS23485	0.12	-1.0
4,899,573	-		BWI76_RS23485	0.12	-1.1
4,899,573	-		BWI76_RS23485	0.12	-0.7
4,899,608	-		BWI76_RS23485	0.17	+1.0
4,899,613	+		BWI76_RS23485	0.18	+0.9
4,899,638	+		BWI76_RS23485	0.22	-1.0
4,899,641	-		BWI76_RS23485	0.22	-0.5
4,899,675	-		BWI76_RS23485	0.27	+0.1
4,899,747	-		BWI76_RS23485	0.38	-0.3
4,899,766	-		BWI76_RS23485	0.41	-0.1
4,899,796	-		BWI76_RS23485	0.46	-0.1
4,899,806	-		BWI76_RS23485	0.47	-0.7
4,900,024	+		BWI76_RS23485	0.81	+0.5
4,900,092	+				+1.3
4,900,095	-				-0.5
4,900,095	-				-0.1
4,900,095	-				-1.8
4,900,133	+				+0.3
4,900,185	-				-1.7
4,900,194	+				-2.1
4,900,217	-				-1.1
4,900,255	+				+0.9
4,900,278	-		BWI76_RS23490	0.12	-1.4
4,900,339	+		BWI76_RS23490	0.18	-2.2
4,900,405	+		BWI76_RS23490	0.24	+0.4
4,900,405	+		BWI76_RS23490	0.24	-3.5
4,900,405	+		BWI76_RS23490	0.24	-1.8
4,900,405	+		BWI76_RS23490	0.24	-1.0
4,900,405	+		BWI76_RS23490	0.24	-2.3
4,900,413	-		BWI76_RS23490	0.25	-1.8
4,900,413	-		BWI76_RS23490	0.25	-1.9
4,900,413	-		BWI76_RS23490	0.25	-3.5
4,900,413	-		BWI76_RS23490	0.25	-2.1
4,900,413	-		BWI76_RS23490	0.25	-0.7
4,900,465	+		BWI76_RS23490	0.30	-0.7
4,900,484	-		BWI76_RS23490	0.32	-0.1
4,900,588	+		BWI76_RS23490	0.43	-1.4
4,900,894	-		BWI76_RS23490	0.73	+0.7
4,901,047	-		BWI76_RS23490	0.89	-0.6
4,901,056	+		BWI76_RS23490	0.90	-0.3
4,901,085	+				+0.1
4,901,124	-				-1.3
4,901,193	-				-1.4
4,901,219	+				+1.9
4,901,363	-				-2.0
4,901,381	-				-2.6
4,901,483	+		BWI76_RS23495	0.13	-1.4
4,901,679	+		BWI76_RS23495	0.21	-0.4
4,901,682	-		BWI76_RS23495	0.21	-0.7
4,901,697	+		BWI76_RS23495	0.22	-0.5
4,901,723	-		BWI76_RS23495	0.23	+0.9
4,901,735	-		BWI76_RS23495	0.24	-3.8
4,901,790	-		BWI76_RS23495	0.26	-2.2
4,901,823	-		BWI76_RS23495	0.27	-1.1
4,901,898	+		BWI76_RS23495	0.30	-1.0
4,902,101	-		BWI76_RS23495	0.38	-1.6