Experiment: RCH2_defined_noCarbon with Mixed culture; Arthrobacter sp. AnTP99 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS23215 and BWI76_RS23220 are separated by 227 nucleotides BWI76_RS23220 and BWI76_RS23225 are separated by 40 nucleotides
BWI76_RS23215: BWI76_RS23215 - N-acetylmuramoyl-L-alanine amidase, at 4,835,600 to 4,836,853
_RS23215
BWI76_RS23220: BWI76_RS23220 - amino-acid N-acetyltransferase, at 4,837,081 to 4,838,412
_RS23220
BWI76_RS23225: BWI76_RS23225 - exonuclease V subunit alpha, at 4,838,453 to 4,840,288
_RS23225
Position (kb)
4837
4838
4839 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 4836.246 kb on + strand, within BWI76_RS23215 at 4836.329 kb on + strand, within BWI76_RS23215 at 4836.364 kb on - strand, within BWI76_RS23215 at 4836.448 kb on + strand, within BWI76_RS23215 at 4836.448 kb on + strand, within BWI76_RS23215 at 4836.499 kb on + strand, within BWI76_RS23215 at 4836.903 kb on + strand at 4836.923 kb on + strand at 4837.004 kb on + strand at 4837.458 kb on - strand, within BWI76_RS23220 at 4837.462 kb on - strand, within BWI76_RS23220 at 4837.491 kb on + strand, within BWI76_RS23220 at 4837.491 kb on + strand, within BWI76_RS23220 at 4837.499 kb on - strand, within BWI76_RS23220 at 4837.499 kb on - strand, within BWI76_RS23220 at 4837.631 kb on + strand, within BWI76_RS23220 at 4837.644 kb on - strand, within BWI76_RS23220 at 4838.047 kb on - strand, within BWI76_RS23220 at 4838.141 kb on - strand, within BWI76_RS23220 at 4838.516 kb on + strand at 4838.516 kb on + strand at 4838.561 kb on + strand at 4838.624 kb on - strand at 4838.649 kb on - strand, within BWI76_RS23225 at 4838.700 kb on + strand, within BWI76_RS23225 at 4839.068 kb on - strand, within BWI76_RS23225 at 4839.150 kb on - strand, within BWI76_RS23225 at 4839.411 kb on + strand, within BWI76_RS23225
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_noCarbon with Mixed culture; Arthrobacter sp. AnTP99 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x remove 4,836,246 + BWI76_RS23215 0.52 +1.2 4,836,329 + BWI76_RS23215 0.58 +1.1 4,836,364 - BWI76_RS23215 0.61 -0.1 4,836,448 + BWI76_RS23215 0.68 -0.1 4,836,448 + BWI76_RS23215 0.68 +0.9 4,836,499 + BWI76_RS23215 0.72 +0.7 4,836,903 + +0.3 4,836,923 + -0.8 4,837,004 + -3.2 4,837,458 - BWI76_RS23220 0.28 -3.5 4,837,462 - BWI76_RS23220 0.29 -5.4 4,837,491 + BWI76_RS23220 0.31 -3.4 4,837,491 + BWI76_RS23220 0.31 -0.7 4,837,499 - BWI76_RS23220 0.31 -4.4 4,837,499 - BWI76_RS23220 0.31 -5.0 4,837,631 + BWI76_RS23220 0.41 -3.3 4,837,644 - BWI76_RS23220 0.42 -4.2 4,838,047 - BWI76_RS23220 0.73 -2.8 4,838,141 - BWI76_RS23220 0.80 -3.9 4,838,516 + -0.2 4,838,516 + +0.5 4,838,561 + -1.1 4,838,624 - -1.1 4,838,649 - BWI76_RS23225 0.11 -0.9 4,838,700 + BWI76_RS23225 0.13 -0.2 4,839,068 - BWI76_RS23225 0.33 +0.6 4,839,150 - BWI76_RS23225 0.38 +0.2 4,839,411 + BWI76_RS23225 0.52 +1.5
Or see this region's nucleotide sequence