Experiment: RCH2_defined_noCarbon with Mixed culture; Arthrobacter sp. AnTP99 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS21385 and BWI76_RS21390 are separated by 203 nucleotides BWI76_RS21390 and BWI76_RS21395 are separated by 69 nucleotides BWI76_RS21395 and BWI76_RS21400 are separated by 35 nucleotides
BWI76_RS21385: BWI76_RS21385 - tRNA/rRNA methyltransferase, at 4,476,385 to 4,477,458
_RS21385
BWI76_RS21390: BWI76_RS21390 - thiol disulfide reductase thioredoxin, at 4,477,662 to 4,478,087
_RS21390
BWI76_RS21395: BWI76_RS21395 - DTW domain-containing protein, at 4,478,157 to 4,478,855
_RS21395
BWI76_RS21400: BWI76_RS21400 - protein lysine acetyltransferase, at 4,478,891 to 4,481,569
_RS21400
Position (kb) 4477
4478
4479 Strain fitness (log2 ratio) -2
-1
0
1 at 4476.862 kb on - strand, within BWI76_RS21385 at 4477.005 kb on + strand, within BWI76_RS21385 at 4477.019 kb on - strand, within BWI76_RS21385 at 4477.205 kb on - strand, within BWI76_RS21385 at 4477.231 kb on - strand, within BWI76_RS21385 at 4477.368 kb on + strand at 4477.368 kb on + strand at 4477.376 kb on - strand at 4477.415 kb on + strand at 4477.566 kb on - strand at 4477.655 kb on - strand at 4477.689 kb on + strand at 4477.899 kb on + strand, within BWI76_RS21390 at 4477.936 kb on - strand, within BWI76_RS21390 at 4478.299 kb on - strand, within BWI76_RS21395 at 4478.651 kb on + strand, within BWI76_RS21395 at 4478.789 kb on + strand at 4478.813 kb on + strand at 4478.874 kb on + strand at 4479.064 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_noCarbon with Mixed culture; Arthrobacter sp. AnTP99 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x remove 4,476,862 - BWI76_RS21385 0.44 +0.1 4,477,005 + BWI76_RS21385 0.58 -0.2 4,477,019 - BWI76_RS21385 0.59 -0.2 4,477,205 - BWI76_RS21385 0.76 -0.0 4,477,231 - BWI76_RS21385 0.79 -1.1 4,477,368 + +1.1 4,477,368 + +0.1 4,477,376 - +0.0 4,477,415 + -0.2 4,477,566 - -0.5 4,477,655 - +0.5 4,477,689 + +0.2 4,477,899 + BWI76_RS21390 0.56 +0.4 4,477,936 - BWI76_RS21390 0.64 +1.0 4,478,299 - BWI76_RS21395 0.20 -0.2 4,478,651 + BWI76_RS21395 0.71 -0.0 4,478,789 + -1.9 4,478,813 + +0.2 4,478,874 + -1.1 4,479,064 + +0.2
Or see this region's nucleotide sequence