Experiment: RCH2_defined_noCarbon with Mixed culture; Arthrobacter sp. AnTP99 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS17785 and BWI76_RS17790 are separated by 3 nucleotides BWI76_RS17790 and BWI76_RS17795 are separated by 68 nucleotides BWI76_RS17795 and BWI76_RS17800 are separated by 69 nucleotides
BWI76_RS17785: BWI76_RS17785 - septum site-determining protein MinD, at 3,696,778 to 3,697,590
_RS17785
BWI76_RS17790: BWI76_RS17790 - cell division topological specificity factor, at 3,697,594 to 3,697,863
_RS17790
BWI76_RS17795: BWI76_RS17795 - ribonuclease D, at 3,697,932 to 3,699,059
_RS17795
BWI76_RS17800: BWI76_RS17800 - long-chain-fatty-acid--CoA ligase, at 3,699,129 to 3,700,847
_RS17800
Position (kb)
3697
3698
3699
3700 Strain fitness (log2 ratio)
-2
-1
0
1 at 3697.023 kb on + strand, within BWI76_RS17785 at 3697.078 kb on + strand, within BWI76_RS17785 at 3697.086 kb on - strand, within BWI76_RS17785 at 3697.210 kb on - strand, within BWI76_RS17785 at 3697.436 kb on + strand, within BWI76_RS17785 at 3697.436 kb on + strand, within BWI76_RS17785 at 3697.436 kb on + strand, within BWI76_RS17785 at 3697.444 kb on - strand, within BWI76_RS17785 at 3697.925 kb on + strand at 3698.089 kb on - strand, within BWI76_RS17795 at 3698.670 kb on - strand, within BWI76_RS17795 at 3698.717 kb on - strand, within BWI76_RS17795 at 3698.939 kb on + strand, within BWI76_RS17795 at 3699.781 kb on - strand, within BWI76_RS17800 at 3699.888 kb on - strand, within BWI76_RS17800 at 3699.940 kb on - strand, within BWI76_RS17800
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_noCarbon with Mixed culture; Arthrobacter sp. AnTP99 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x remove 3,697,023 + BWI76_RS17785 0.30 -1.1 3,697,078 + BWI76_RS17785 0.37 -1.1 3,697,086 - BWI76_RS17785 0.38 -0.4 3,697,210 - BWI76_RS17785 0.53 +0.9 3,697,436 + BWI76_RS17785 0.81 -0.8 3,697,436 + BWI76_RS17785 0.81 -1.1 3,697,436 + BWI76_RS17785 0.81 -0.7 3,697,444 - BWI76_RS17785 0.82 -1.9 3,697,925 + -0.3 3,698,089 - BWI76_RS17795 0.14 +1.2 3,698,670 - BWI76_RS17795 0.65 +0.4 3,698,717 - BWI76_RS17795 0.70 +0.5 3,698,939 + BWI76_RS17795 0.89 -1.7 3,699,781 - BWI76_RS17800 0.38 -0.2 3,699,888 - BWI76_RS17800 0.44 +0.2 3,699,940 - BWI76_RS17800 0.47 -0.1
Or see this region's nucleotide sequence