Experiment: RCH2_defined_noCarbon with Mixed culture; Arthrobacter sp. AnTP99 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS16645 and BWI76_RS16650 are separated by 93 nucleotides BWI76_RS16650 and BWI76_RS16655 are separated by 30 nucleotides BWI76_RS16655 and BWI76_RS16660 are separated by 308 nucleotides
BWI76_RS16645: BWI76_RS16645 - DeoR family transcriptional regulator, at 3,445,713 to 3,446,483
_RS16645
BWI76_RS16650: BWI76_RS16650 - glyoxalase I, nickel isomerase, at 3,446,577 to 3,446,960
_RS16650
BWI76_RS16655: BWI76_RS16655 - CatA-like O-acetyltransferase, at 3,446,991 to 3,447,630
_RS16655
BWI76_RS16660: BWI76_RS16660 - SfnB family sulfur acquisition oxidoreductase, at 3,447,939 to 3,449,162
_RS16660
Position (kb)
3446
3447
3448 Strain fitness (log2 ratio)
-1
0
1 at 3446.115 kb on - strand, within BWI76_RS16645 at 3446.228 kb on - strand, within BWI76_RS16645 at 3446.228 kb on - strand, within BWI76_RS16645 at 3446.757 kb on - strand, within BWI76_RS16650 at 3446.960 kb on + strand at 3446.981 kb on + strand at 3447.073 kb on + strand, within BWI76_RS16655 at 3447.131 kb on - strand, within BWI76_RS16655 at 3447.451 kb on - strand, within BWI76_RS16655 at 3447.463 kb on - strand, within BWI76_RS16655 at 3447.493 kb on - strand, within BWI76_RS16655 at 3447.735 kb on - strand at 3448.498 kb on - strand, within BWI76_RS16660 at 3448.626 kb on - strand, within BWI76_RS16660
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_noCarbon with Mixed culture; Arthrobacter sp. AnTP99 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x remove 3,446,115 - BWI76_RS16645 0.52 +1.0 3,446,228 - BWI76_RS16645 0.67 +1.0 3,446,228 - BWI76_RS16645 0.67 -0.1 3,446,757 - BWI76_RS16650 0.47 -0.8 3,446,960 + -1.0 3,446,981 + +0.6 3,447,073 + BWI76_RS16655 0.13 +0.6 3,447,131 - BWI76_RS16655 0.22 +1.4 3,447,451 - BWI76_RS16655 0.72 +0.5 3,447,463 - BWI76_RS16655 0.74 +0.4 3,447,493 - BWI76_RS16655 0.78 -1.2 3,447,735 - -0.1 3,448,498 - BWI76_RS16660 0.46 +0.3 3,448,626 - BWI76_RS16660 0.56 +0.4
Or see this region's nucleotide sequence