Experiment: RCH2_defined_noCarbon with Mixed culture; Arthrobacter sp. AnTP99 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS15675 and BWI76_RS15680 are separated by 111 nucleotides BWI76_RS15680 and BWI76_RS15685 are separated by 85 nucleotides BWI76_RS15685 and BWI76_RS15690 overlap by 50 nucleotides BWI76_RS15690 and BWI76_RS15695 overlap by 4 nucleotides BWI76_RS15695 and BWI76_RS15700 overlap by 4 nucleotides BWI76_RS15700 and BWI76_RS15705 overlap by 4 nucleotides
BWI76_RS15675: BWI76_RS15675 - hypothetical protein, at 3,275,020 to 3,275,265
_RS15675
BWI76_RS15680: BWI76_RS15680 - hypothetical protein, at 3,275,377 to 3,275,562
_RS15680
BWI76_RS15685: BWI76_RS15685 - hypothetical protein, at 3,275,648 to 3,275,839
_RS15685
BWI76_RS15690: BWI76_RS15690 - hypothetical protein, at 3,275,790 to 3,276,065
_RS15690
BWI76_RS15695: BWI76_RS15695 - hypothetical protein, at 3,276,062 to 3,276,406
_RS15695
BWI76_RS15700: BWI76_RS15700 - hypothetical protein, at 3,276,403 to 3,276,945
_RS15700
BWI76_RS15705: BWI76_RS15705 - putative holin protein, at 3,276,942 to 3,277,253
_RS15705
Position (kb)
3276
3277 Strain fitness (log2 ratio)
-2
-1
0
1 at 3275.165 kb on + strand, within BWI76_RS15675 at 3275.186 kb on + strand, within BWI76_RS15675 at 3275.194 kb on - strand, within BWI76_RS15675 at 3275.194 kb on - strand, within BWI76_RS15675 at 3275.194 kb on - strand, within BWI76_RS15675 at 3275.221 kb on - strand, within BWI76_RS15675 at 3275.221 kb on - strand, within BWI76_RS15675 at 3275.278 kb on + strand at 3275.322 kb on - strand at 3275.491 kb on + strand, within BWI76_RS15680 at 3275.514 kb on - strand, within BWI76_RS15680 at 3275.533 kb on + strand, within BWI76_RS15680 at 3275.611 kb on + strand at 3275.619 kb on - strand at 3275.676 kb on - strand, within BWI76_RS15685 at 3275.808 kb on + strand at 3275.959 kb on + strand, within BWI76_RS15690 at 3276.178 kb on + strand, within BWI76_RS15695 at 3276.218 kb on - strand, within BWI76_RS15695 at 3276.253 kb on - strand at 3276.255 kb on - strand, within BWI76_RS15695 at 3276.538 kb on - strand, within BWI76_RS15700 at 3276.543 kb on - strand, within BWI76_RS15700 at 3276.606 kb on - strand, within BWI76_RS15700 at 3276.636 kb on + strand, within BWI76_RS15700 at 3276.659 kb on + strand, within BWI76_RS15700 at 3276.826 kb on - strand, within BWI76_RS15700 at 3276.971 kb on + strand at 3276.989 kb on - strand, within BWI76_RS15705 at 3276.999 kb on - strand, within BWI76_RS15705 at 3277.031 kb on - strand, within BWI76_RS15705 at 3277.062 kb on + strand, within BWI76_RS15705 at 3277.212 kb on - strand, within BWI76_RS15705 at 3277.243 kb on + strand at 3277.251 kb on - strand at 3277.300 kb on + strand at 3277.307 kb on - strand at 3277.308 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_noCarbon with Mixed culture; Arthrobacter sp. AnTP99 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x remove 3,275,165 + BWI76_RS15675 0.59 -1.0 3,275,186 + BWI76_RS15675 0.67 -0.4 3,275,194 - BWI76_RS15675 0.71 -0.3 3,275,194 - BWI76_RS15675 0.71 +0.4 3,275,194 - BWI76_RS15675 0.71 -2.4 3,275,221 - BWI76_RS15675 0.82 -0.9 3,275,221 - BWI76_RS15675 0.82 -0.4 3,275,278 + +0.7 3,275,322 - +1.1 3,275,491 + BWI76_RS15680 0.61 -1.4 3,275,514 - BWI76_RS15680 0.74 -1.1 3,275,533 + BWI76_RS15680 0.84 -0.9 3,275,611 + +1.5 3,275,619 - -1.9 3,275,676 - BWI76_RS15685 0.15 -0.5 3,275,808 + -1.4 3,275,959 + BWI76_RS15690 0.61 -1.2 3,276,178 + BWI76_RS15695 0.34 -1.1 3,276,218 - BWI76_RS15695 0.45 -1.7 3,276,253 - +1.1 3,276,255 - BWI76_RS15695 0.56 -1.5 3,276,538 - BWI76_RS15700 0.25 -0.3 3,276,543 - BWI76_RS15700 0.26 -0.6 3,276,606 - BWI76_RS15700 0.37 -0.5 3,276,636 + BWI76_RS15700 0.43 -0.6 3,276,659 + BWI76_RS15700 0.47 -1.2 3,276,826 - BWI76_RS15700 0.78 -0.5 3,276,971 + -0.8 3,276,989 - BWI76_RS15705 0.15 -0.9 3,276,999 - BWI76_RS15705 0.18 +0.5 3,277,031 - BWI76_RS15705 0.29 -0.3 3,277,062 + BWI76_RS15705 0.38 -0.3 3,277,212 - BWI76_RS15705 0.87 -1.4 3,277,243 + +0.0 3,277,251 - -0.2 3,277,300 + -0.5 3,277,307 - -0.9 3,277,308 - -0.1
Or see this region's nucleotide sequence