Experiment: RCH2_defined_noCarbon with Mixed culture; Arthrobacter sp. AnTP99 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS08745 and BWI76_RS08750 are separated by 104 nucleotides BWI76_RS08750 and BWI76_RS08755 are separated by 69 nucleotides BWI76_RS08755 and BWI76_RS08760 are separated by 85 nucleotides
BWI76_RS08745: BWI76_RS08745 - proline-specific permease, at 1,843,008 to 1,844,387
_RS08745
BWI76_RS08750: BWI76_RS08750 - kinase inhibitor, at 1,844,492 to 1,844,968
_RS08750
BWI76_RS08755: BWI76_RS08755 - adenosylmethionine--8-amino-7-oxononanoate transaminase, at 1,845,038 to 1,846,327
_RS08755
BWI76_RS08760: BWI76_RS08760 - biotin synthase, at 1,846,413 to 1,847,453
_RS08760
Position (kb) 1845
1846
1847 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 1844.312 kb on + strand at 1844.312 kb on + strand at 1844.867 kb on - strand, within BWI76_RS08750 at 1845.273 kb on - strand, within BWI76_RS08755 at 1845.557 kb on + strand, within BWI76_RS08755 at 1845.732 kb on + strand, within BWI76_RS08755 at 1845.852 kb on - strand, within BWI76_RS08755 at 1845.936 kb on + strand, within BWI76_RS08755 at 1846.147 kb on + strand, within BWI76_RS08755 at 1846.183 kb on - strand, within BWI76_RS08755 at 1846.408 kb on + strand at 1846.536 kb on - strand, within BWI76_RS08760 at 1846.653 kb on + strand, within BWI76_RS08760 at 1846.747 kb on + strand, within BWI76_RS08760 at 1846.872 kb on + strand, within BWI76_RS08760 at 1846.937 kb on - strand, within BWI76_RS08760
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_noCarbon with Mixed culture; Arthrobacter sp. AnTP99 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x remove 1,844,312 + -0.0 1,844,312 + +1.0 1,844,867 - BWI76_RS08750 0.79 -0.0 1,845,273 - BWI76_RS08755 0.18 +1.9 1,845,557 + BWI76_RS08755 0.40 +0.0 1,845,732 + BWI76_RS08755 0.54 +1.4 1,845,852 - BWI76_RS08755 0.63 +0.2 1,845,936 + BWI76_RS08755 0.70 +0.6 1,846,147 + BWI76_RS08755 0.86 +0.4 1,846,183 - BWI76_RS08755 0.89 +0.6 1,846,408 + +0.8 1,846,536 - BWI76_RS08760 0.12 -0.1 1,846,653 + BWI76_RS08760 0.23 +0.2 1,846,747 + BWI76_RS08760 0.32 -3.4 1,846,872 + BWI76_RS08760 0.44 +2.0 1,846,937 - BWI76_RS08760 0.50 -0.1
Or see this region's nucleotide sequence