Experiment: RCH2_defined_noCarbon with Mixed culture; Arthrobacter sp. AnTP99 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS08440 and BWI76_RS08445 are separated by 185 nucleotides BWI76_RS08445 and BWI76_RS08450 are separated by 9 nucleotides BWI76_RS08450 and BWI76_RS08455 are separated by 11 nucleotides
BWI76_RS08440: BWI76_RS08440 - hypothetical protein, at 1,786,734 to 1,787,636
_RS08440
BWI76_RS08445: BWI76_RS08445 - cob(I)yrinic acid a,c-diamide adenosyltransferase, at 1,787,822 to 1,788,424
_RS08445
BWI76_RS08450: BWI76_RS08450 - fumarate hydratase, at 1,788,434 to 1,790,086
_RS08450
BWI76_RS08455: BWI76_RS08455 - glutaminase, at 1,790,098 to 1,791,099
_RS08455
Position (kb)
1788
1789
1790
1791 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1787.614 kb on + strand at 1787.792 kb on - strand at 1787.913 kb on - strand, within BWI76_RS08445 at 1788.016 kb on + strand, within BWI76_RS08445 at 1788.018 kb on + strand, within BWI76_RS08445 at 1788.026 kb on - strand, within BWI76_RS08445 at 1788.186 kb on + strand, within BWI76_RS08445 at 1788.221 kb on - strand, within BWI76_RS08445 at 1788.280 kb on - strand, within BWI76_RS08445 at 1788.432 kb on + strand at 1788.585 kb on - strand at 1788.646 kb on + strand, within BWI76_RS08450 at 1788.761 kb on - strand, within BWI76_RS08450 at 1789.050 kb on + strand, within BWI76_RS08450 at 1789.139 kb on + strand, within BWI76_RS08450 at 1789.254 kb on + strand at 1789.254 kb on + strand, within BWI76_RS08450 at 1789.496 kb on - strand, within BWI76_RS08450 at 1789.680 kb on + strand, within BWI76_RS08450 at 1790.600 kb on + strand, within BWI76_RS08455 at 1790.609 kb on - strand, within BWI76_RS08455 at 1790.811 kb on + strand, within BWI76_RS08455 at 1790.930 kb on - strand, within BWI76_RS08455 at 1790.942 kb on + strand, within BWI76_RS08455 at 1791.044 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_noCarbon with Mixed culture; Arthrobacter sp. AnTP99 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x remove 1,787,614 + +0.7 1,787,792 - -0.9 1,787,913 - BWI76_RS08445 0.15 -0.0 1,788,016 + BWI76_RS08445 0.32 +0.4 1,788,018 + BWI76_RS08445 0.33 -0.7 1,788,026 - BWI76_RS08445 0.34 -0.3 1,788,186 + BWI76_RS08445 0.60 +0.1 1,788,221 - BWI76_RS08445 0.66 -0.0 1,788,280 - BWI76_RS08445 0.76 +2.2 1,788,432 + -0.1 1,788,585 - -0.7 1,788,646 + BWI76_RS08450 0.13 +1.5 1,788,761 - BWI76_RS08450 0.20 +0.4 1,789,050 + BWI76_RS08450 0.37 -2.1 1,789,139 + BWI76_RS08450 0.43 -0.2 1,789,254 + -0.1 1,789,254 + BWI76_RS08450 0.50 +0.2 1,789,496 - BWI76_RS08450 0.64 +0.3 1,789,680 + BWI76_RS08450 0.75 +1.8 1,790,600 + BWI76_RS08455 0.50 -0.2 1,790,609 - BWI76_RS08455 0.51 -0.8 1,790,811 + BWI76_RS08455 0.71 -0.9 1,790,930 - BWI76_RS08455 0.83 -0.7 1,790,942 + BWI76_RS08455 0.84 +0.6 1,791,044 + -1.5
Or see this region's nucleotide sequence