Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS07135

Experiment: RCH2_defined_noCarbon with Mixed culture; Arthrobacter sp. AnTP99 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_noCarbon with Mixed culture; Arthrobacter sp. AnTP99 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x
1,498,161	+		BWI76_RS07130	0.24	+0.2
1,498,161	+		BWI76_RS07130	0.24	+0.2
1,498,193	+		BWI76_RS07130	0.26	-0.9
1,498,209	+		BWI76_RS07130	0.27	-2.1
1,498,214	+		BWI76_RS07130	0.28	-0.3
1,498,214	+		BWI76_RS07130	0.28	-0.7
1,498,214	+		BWI76_RS07130	0.28	+0.1
1,498,214	+		BWI76_RS07130	0.28	+0.1
1,498,222	-		BWI76_RS07130	0.28	-0.6
1,498,222	-		BWI76_RS07130	0.28	-0.1
1,498,222	-		BWI76_RS07130	0.28	+0.3
1,498,227	+		BWI76_RS07130	0.29	-1.3
1,498,228	+		BWI76_RS07130	0.29	-0.9
1,498,228	-		BWI76_RS07130	0.29	+0.9
1,498,236	-		BWI76_RS07130	0.30	-0.7
1,498,236	-		BWI76_RS07130	0.30	-2.0
1,498,282	+		BWI76_RS07130	0.33	+0.9
1,498,283	+		BWI76_RS07130	0.33	+0.2
1,498,291	-				-0.7
1,498,296	-		BWI76_RS07130	0.34	-0.8
1,498,346	-		BWI76_RS07130	0.39	-0.4
1,498,347	-		BWI76_RS07130	0.39	-1.4
1,498,360	-		BWI76_RS07130	0.40	-0.3
1,498,363	+		BWI76_RS07130	0.40	-1.0
1,498,365	+		BWI76_RS07130	0.40	-0.1
1,498,393	-		BWI76_RS07130	0.42	-0.3
1,498,432	+		BWI76_RS07130	0.45	-1.1
1,498,432	+		BWI76_RS07130	0.45	-0.9
1,498,440	-		BWI76_RS07130	0.46	-3.0
1,498,440	-		BWI76_RS07130	0.46	-1.7
1,498,449	+		BWI76_RS07130	0.47	+0.3
1,498,449	+		BWI76_RS07130	0.47	-0.6
1,498,450	-		BWI76_RS07130	0.47	+0.6
1,498,450	-				+0.9
1,498,451	+		BWI76_RS07130	0.47	-1.4
1,498,457	-		BWI76_RS07130	0.47	-0.7
1,498,459	-		BWI76_RS07130	0.48	-1.3
1,498,459	-		BWI76_RS07130	0.48	-0.1
1,498,459	-		BWI76_RS07130	0.48	-2.6
1,498,463	-		BWI76_RS07130	0.48	-1.7
1,498,464	+		BWI76_RS07130	0.48	-0.3
1,498,464	+		BWI76_RS07130	0.48	+0.8
1,498,465	+		BWI76_RS07130	0.48	-2.3
1,498,473	-		BWI76_RS07130	0.49	-3.0
1,498,473	-		BWI76_RS07130	0.49	-0.8
1,498,473	-		BWI76_RS07130	0.49	-1.2
1,498,473	-		BWI76_RS07130	0.49	+0.9
1,498,473	-		BWI76_RS07130	0.49	-0.2
1,498,473	-		BWI76_RS07130	0.49	+1.5
1,498,475	+		BWI76_RS07130	0.49	-2.1
1,498,475	+		BWI76_RS07130	0.49	-0.1
1,498,475	+		BWI76_RS07130	0.49	+1.3
1,498,475	+		BWI76_RS07130	0.49	+0.4
1,498,475	+		BWI76_RS07130	0.49	-0.0
1,498,483	-		BWI76_RS07130	0.50	+1.3
1,498,483	-		BWI76_RS07130	0.50	+0.2
1,498,483	-		BWI76_RS07130	0.50	-1.1
1,498,498	+		BWI76_RS07130	0.51	-0.3
1,498,562	-		BWI76_RS07130	0.56	-2.9
1,498,607	-		BWI76_RS07130	0.60	+0.4
1,498,615	-		BWI76_RS07130	0.60	-0.2
1,498,696	-		BWI76_RS07130	0.67	-0.3
1,498,696	-		BWI76_RS07130	0.67	-3.2
1,498,749	+		BWI76_RS07130	0.71	-0.1
1,498,756	+		BWI76_RS07130	0.72	-2.3
1,498,771	+		BWI76_RS07130	0.73	-0.6
1,498,771	+		BWI76_RS07130	0.73	-0.1
1,498,778	-		BWI76_RS07130	0.73	+0.3
1,498,832	+		BWI76_RS07130	0.78	-0.6
1,498,850	+		BWI76_RS07130	0.79	+0.0
1,498,850	+		BWI76_RS07130	0.79	+0.6
1,498,850	+		BWI76_RS07130	0.79	-0.7
1,498,912	+		BWI76_RS07130	0.84	-0.1
1,498,920	-		BWI76_RS07130	0.85	-2.4
1,498,968	-		BWI76_RS07130	0.89	+0.9
1,498,993	+				-1.0
1,498,998	+				+0.7
1,499,006	-				+0.6
1,499,142	-				-2.3
1,499,160	+				-2.1
1,499,167	+				-0.1
1,499,209	+		BWI76_RS07135	0.10	-1.9
1,499,209	+		BWI76_RS07135	0.10	-0.1
1,499,215	+		BWI76_RS07135	0.11	-1.1
1,499,228	+		BWI76_RS07135	0.13	-0.8
1,499,236	-		BWI76_RS07135	0.14	-1.0
1,499,236	-		BWI76_RS07135	0.14	-0.1
1,499,293	+		BWI76_RS07135	0.22	-0.4
1,499,293	+		BWI76_RS07135	0.22	-1.4
1,499,293	+		BWI76_RS07135	0.22	-1.9
1,499,300	+		BWI76_RS07135	0.23	+0.9
1,499,301	-		BWI76_RS07135	0.23	+0.9
1,499,305	+		BWI76_RS07135	0.24	-0.7
1,499,305	+		BWI76_RS07135	0.24	-0.8
1,499,308	-		BWI76_RS07135	0.24	-0.4
1,499,308	-		BWI76_RS07135	0.24	-1.1
1,499,313	-		BWI76_RS07135	0.25	-2.1
1,499,318	+		BWI76_RS07135	0.25	-1.4
1,499,318	+		BWI76_RS07135	0.25	+0.1
1,499,318	+		BWI76_RS07135	0.25	-1.7
1,499,318	+		BWI76_RS07135	0.25	+0.3
1,499,326	-		BWI76_RS07135	0.26	-1.7
1,499,326	-		BWI76_RS07135	0.26	+0.4
1,499,326	-		BWI76_RS07135	0.26	-1.3
1,499,332	+		BWI76_RS07135	0.27	-0.3
1,499,332	+		BWI76_RS07135	0.27	-0.1
1,499,361	+		BWI76_RS07135	0.31	+0.9
1,499,361	+		BWI76_RS07135	0.31	-0.7
1,499,361	+		BWI76_RS07135	0.31	-0.5
1,499,361	+		BWI76_RS07135	0.31	+0.3
1,499,369	-		BWI76_RS07135	0.32	-0.2
1,499,371	+		BWI76_RS07135	0.33	+0.9
1,499,371	-		BWI76_RS07135	0.33	-0.7
1,499,389	+		BWI76_RS07135	0.35	-0.1
1,499,389	+		BWI76_RS07135	0.35	-0.4
1,499,397	-		BWI76_RS07135	0.36	-0.1
1,499,420	+		BWI76_RS07135	0.40	-0.1
1,499,428	-		BWI76_RS07135	0.41	-1.4
1,499,455	+		BWI76_RS07135	0.45	-1.7
1,499,551	+		BWI76_RS07135	0.58	+0.6
1,499,647	+		BWI76_RS07135	0.71	-1.4
1,499,786	+				-0.3
1,499,806	-				-0.2
1,499,808	+				-0.1
1,499,808	+				-0.1
1,499,808	+				+0.9
1,499,808	+				-0.9
1,499,808	+				-0.8
1,499,808	+				-1.4
1,499,808	+				+0.9
1,499,808	+				-3.8
1,499,808	+				-2.3
1,499,808	+				+1.2
1,499,808	+				-0.4
1,499,808	+				-0.4
1,499,816	-				-2.1
1,499,818	+				-1.6
1,499,818	+				+0.5
1,499,818	+				+0.7
1,499,818	+				-1.9
1,499,823	+				+0.3
1,499,823	+				+0.2
1,499,831	+				-1.2
1,499,837	+				+0.9
1,499,837	+				+0.0
1,499,888	+				-0.1
1,499,888	+				-0.3
1,499,902	+				+0.5
1,499,906	+				-0.8
1,499,944	-				-0.4
1,499,944	-				-1.6
1,499,944	-				+0.9
1,499,995	-				-1.2
1,500,000	+				-0.1
1,500,000	-				-1.1
1,500,000	-				-0.6
1,500,000	-				+0.9
1,500,000	-				-0.8
1,500,000	-				-0.2
1,500,047	-				-0.7
1,500,047	-				-1.5
1,500,047	-				-0.4
1,500,078	-				-0.9
1,500,078	-				+0.7
1,500,097	-				-2.9
1,500,099	-				-0.0
1,500,099	-				-0.3
1,500,185	-				+0.9
1,500,193	-				-1.1
1,500,281	-		BWI76_RS07140	0.21	-1.4
1,500,291	-		BWI76_RS07140	0.24	+0.8
1,500,466	+				+0.9
1,500,539	-				+0.9