Experiment: RCH2_defined_noCarbon with Mixed culture; Arthrobacter sp. AnTP99 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS04205 and BWI76_RS04210 are separated by 209 nucleotides BWI76_RS04210 and BWI76_RS04215 are separated by 12 nucleotides BWI76_RS04215 and BWI76_RS04220 overlap by 1 nucleotides
BWI76_RS04205: BWI76_RS04205 - right oriC-binding transcriptional activator, at 864,977 to 865,846
_RS04205
BWI76_RS04210: BWI76_RS04210 - hypothetical protein, at 866,056 to 866,529
_RS04210
BWI76_RS04215: BWI76_RS04215 - DNA-binding response regulator, at 866,542 to 867,231
_RS04215
BWI76_RS04220: BWI76_RS04220 - two-component sensor histidine kinase, at 867,231 to 868,655
_RS04220
Position (kb) 866
867 Strain fitness (log2 ratio) -2
-1
0
1
2 at 865.206 kb on + strand, within BWI76_RS04205 at 865.409 kb on + strand, within BWI76_RS04205 at 865.410 kb on + strand, within BWI76_RS04205 at 865.416 kb on - strand, within BWI76_RS04205 at 865.420 kb on + strand, within BWI76_RS04205 at 865.435 kb on + strand, within BWI76_RS04205 at 865.538 kb on + strand, within BWI76_RS04205 at 865.551 kb on - strand, within BWI76_RS04205 at 865.653 kb on - strand, within BWI76_RS04205 at 865.759 kb on - strand, within BWI76_RS04205 at 865.767 kb on + strand at 865.800 kb on + strand at 865.809 kb on + strand at 865.811 kb on + strand at 865.811 kb on + strand at 865.811 kb on + strand at 865.811 kb on + strand at 865.811 kb on + strand at 865.811 kb on + strand at 865.811 kb on + strand at 865.819 kb on - strand at 865.819 kb on - strand at 865.819 kb on - strand at 865.819 kb on - strand at 865.819 kb on - strand at 865.859 kb on + strand at 865.859 kb on + strand at 865.859 kb on + strand at 865.866 kb on + strand at 866.247 kb on + strand, within BWI76_RS04210 at 866.258 kb on + strand, within BWI76_RS04210 at 866.279 kb on + strand, within BWI76_RS04210 at 866.279 kb on + strand, within BWI76_RS04210 at 866.287 kb on - strand, within BWI76_RS04210 at 866.551 kb on + strand at 866.598 kb on + strand at 866.606 kb on - strand at 866.606 kb on - strand at 866.734 kb on - strand, within BWI76_RS04215 at 866.786 kb on - strand, within BWI76_RS04215 at 866.786 kb on - strand, within BWI76_RS04215 at 866.803 kb on - strand, within BWI76_RS04215 at 867.088 kb on + strand, within BWI76_RS04215 at 867.103 kb on + strand, within BWI76_RS04215 at 867.132 kb on - strand, within BWI76_RS04215 at 867.215 kb on + strand at 867.215 kb on + strand at 867.356 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_noCarbon with Mixed culture; Arthrobacter sp. AnTP99 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x remove 865,206 + BWI76_RS04205 0.26 +0.4 865,409 + BWI76_RS04205 0.50 +0.2 865,410 + BWI76_RS04205 0.50 +0.7 865,416 - BWI76_RS04205 0.50 +0.1 865,420 + BWI76_RS04205 0.51 +2.3 865,435 + BWI76_RS04205 0.53 +0.1 865,538 + BWI76_RS04205 0.64 -0.2 865,551 - BWI76_RS04205 0.66 -2.1 865,653 - BWI76_RS04205 0.78 +0.7 865,759 - BWI76_RS04205 0.90 +0.2 865,767 + -0.1 865,800 + +0.3 865,809 + -0.3 865,811 + +0.6 865,811 + -0.9 865,811 + -1.7 865,811 + -0.9 865,811 + -1.6 865,811 + +0.2 865,811 + +0.0 865,819 - +0.2 865,819 - +0.5 865,819 - +1.1 865,819 - +1.1 865,819 - +0.1 865,859 + +0.3 865,859 + +0.9 865,859 + +0.0 865,866 + +0.7 866,247 + BWI76_RS04210 0.40 +1.6 866,258 + BWI76_RS04210 0.43 +1.4 866,279 + BWI76_RS04210 0.47 +0.9 866,279 + BWI76_RS04210 0.47 +0.6 866,287 - BWI76_RS04210 0.49 +0.3 866,551 + -0.5 866,598 + +0.5 866,606 - +0.2 866,606 - -0.5 866,734 - BWI76_RS04215 0.28 -0.1 866,786 - BWI76_RS04215 0.35 +0.6 866,786 - BWI76_RS04215 0.35 +0.2 866,803 - BWI76_RS04215 0.38 +0.4 867,088 + BWI76_RS04215 0.79 +0.3 867,103 + BWI76_RS04215 0.81 +0.6 867,132 - BWI76_RS04215 0.86 -0.9 867,215 + -0.1 867,215 + -0.1 867,356 + +0.2
Or see this region's nucleotide sequence