Experiment: RCH2_defined_noCarbon with Mixed culture; Arthrobacter sp. AnTP99 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS02700 and BWI76_RS02705 are separated by 115 nucleotides BWI76_RS02705 and BWI76_RS02710 are separated by 82 nucleotides
BWI76_RS02700: BWI76_RS02700 - D-serine/D-alanine/glycine transporter, at 546,870 to 548,273
_RS02700
BWI76_RS02705: BWI76_RS02705 - iron-sulfur cluster repair di-iron protein, at 548,389 to 549,051
_RS02705
BWI76_RS02710: BWI76_RS02710 - EamA family transporter, at 549,134 to 550,105
_RS02710
Position (kb) 548
549
550 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 547.541 kb on - strand, within BWI76_RS02700 at 547.549 kb on + strand, within BWI76_RS02700 at 547.559 kb on + strand, within BWI76_RS02700 at 547.683 kb on + strand, within BWI76_RS02700 at 547.698 kb on - strand, within BWI76_RS02700 at 547.784 kb on - strand, within BWI76_RS02700 at 547.825 kb on + strand, within BWI76_RS02700 at 547.833 kb on - strand at 547.835 kb on + strand, within BWI76_RS02700 at 547.848 kb on - strand at 547.924 kb on + strand, within BWI76_RS02700 at 548.096 kb on + strand, within BWI76_RS02700 at 548.120 kb on + strand, within BWI76_RS02700 at 548.215 kb on + strand at 548.218 kb on - strand at 548.258 kb on - strand at 548.408 kb on + strand at 548.408 kb on + strand at 548.519 kb on + strand, within BWI76_RS02705 at 548.554 kb on - strand, within BWI76_RS02705 at 548.615 kb on + strand, within BWI76_RS02705 at 548.615 kb on + strand, within BWI76_RS02705 at 548.684 kb on - strand, within BWI76_RS02705 at 548.701 kb on - strand, within BWI76_RS02705 at 549.182 kb on + strand at 549.280 kb on - strand, within BWI76_RS02710 at 549.395 kb on + strand, within BWI76_RS02710 at 549.408 kb on - strand, within BWI76_RS02710 at 549.432 kb on - strand, within BWI76_RS02710 at 549.573 kb on + strand, within BWI76_RS02710 at 549.583 kb on + strand, within BWI76_RS02710 at 549.591 kb on - strand, within BWI76_RS02710 at 549.591 kb on - strand, within BWI76_RS02710 at 549.602 kb on - strand, within BWI76_RS02710 at 549.711 kb on + strand, within BWI76_RS02710 at 549.716 kb on + strand, within BWI76_RS02710 at 549.857 kb on + strand, within BWI76_RS02710 at 549.857 kb on + strand, within BWI76_RS02710 at 549.857 kb on + strand, within BWI76_RS02710 at 549.959 kb on + strand, within BWI76_RS02710
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_noCarbon with Mixed culture; Arthrobacter sp. AnTP99 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x remove 547,541 - BWI76_RS02700 0.48 +0.2 547,549 + BWI76_RS02700 0.48 +0.1 547,559 + BWI76_RS02700 0.49 +0.3 547,683 + BWI76_RS02700 0.58 +0.5 547,698 - BWI76_RS02700 0.59 -1.8 547,784 - BWI76_RS02700 0.65 -0.6 547,825 + BWI76_RS02700 0.68 -0.0 547,833 - -1.3 547,835 + BWI76_RS02700 0.69 +0.1 547,848 - +0.2 547,924 + BWI76_RS02700 0.75 +0.1 548,096 + BWI76_RS02700 0.87 +1.2 548,120 + BWI76_RS02700 0.89 -0.2 548,215 + +0.4 548,218 - +2.8 548,258 - -0.2 548,408 + -0.6 548,408 + +0.1 548,519 + BWI76_RS02705 0.20 -0.0 548,554 - BWI76_RS02705 0.25 -0.2 548,615 + BWI76_RS02705 0.34 +0.2 548,615 + BWI76_RS02705 0.34 +0.4 548,684 - BWI76_RS02705 0.44 +0.7 548,701 - BWI76_RS02705 0.47 +2.6 549,182 + +0.7 549,280 - BWI76_RS02710 0.15 +0.0 549,395 + BWI76_RS02710 0.27 +2.9 549,408 - BWI76_RS02710 0.28 +2.7 549,432 - BWI76_RS02710 0.31 -1.1 549,573 + BWI76_RS02710 0.45 +0.4 549,583 + BWI76_RS02710 0.46 +0.6 549,591 - BWI76_RS02710 0.47 -0.1 549,591 - BWI76_RS02710 0.47 -0.0 549,602 - BWI76_RS02710 0.48 +0.2 549,711 + BWI76_RS02710 0.59 -0.1 549,716 + BWI76_RS02710 0.60 -1.6 549,857 + BWI76_RS02710 0.74 +0.9 549,857 + BWI76_RS02710 0.74 -1.5 549,857 + BWI76_RS02710 0.74 +0.1 549,959 + BWI76_RS02710 0.85 -0.3
Or see this region's nucleotide sequence