Experiment: RCH2_defined_noCarbon with Mixed culture; Arthrobacter sp. AnTP99 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS02250 and BWI76_RS02255 are separated by 121 nucleotides BWI76_RS02255 and BWI76_RS02260 overlap by 1 nucleotides
BWI76_RS02250: BWI76_RS02250 - proline/betaine transporter, at 462,856 to 464,358
_RS02250
BWI76_RS02255: BWI76_RS02255 - chaperone-modulator protein CbpM, at 464,480 to 464,785
_RS02255
BWI76_RS02260: BWI76_RS02260 - DNA-binding protein, at 464,785 to 465,705
_RS02260
Position (kb) 464
465 Strain fitness (log2 ratio) -1
0
1 at 463.584 kb on - strand, within BWI76_RS02250 at 463.609 kb on - strand, within BWI76_RS02250 at 463.626 kb on - strand, within BWI76_RS02250 at 463.646 kb on + strand, within BWI76_RS02250 at 463.730 kb on + strand, within BWI76_RS02250 at 463.738 kb on - strand, within BWI76_RS02250 at 463.840 kb on - strand, within BWI76_RS02250 at 463.999 kb on + strand, within BWI76_RS02250 at 464.047 kb on - strand, within BWI76_RS02250 at 464.069 kb on + strand, within BWI76_RS02250 at 464.069 kb on + strand, within BWI76_RS02250 at 464.096 kb on + strand, within BWI76_RS02250 at 464.151 kb on + strand, within BWI76_RS02250 at 464.326 kb on - strand at 464.447 kb on - strand at 464.614 kb on + strand, within BWI76_RS02255 at 464.619 kb on - strand, within BWI76_RS02255 at 464.632 kb on - strand, within BWI76_RS02255 at 464.683 kb on + strand, within BWI76_RS02255 at 464.801 kb on + strand at 464.831 kb on + strand at 464.934 kb on + strand, within BWI76_RS02260 at 464.934 kb on + strand, within BWI76_RS02260 at 465.097 kb on - strand, within BWI76_RS02260 at 465.279 kb on + strand, within BWI76_RS02260 at 465.435 kb on + strand, within BWI76_RS02260 at 465.437 kb on + strand, within BWI76_RS02260 at 465.445 kb on - strand, within BWI76_RS02260 at 465.536 kb on - strand, within BWI76_RS02260 at 465.608 kb on - strand, within BWI76_RS02260 at 465.647 kb on - strand at 465.647 kb on - strand at 465.647 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_noCarbon with Mixed culture; Arthrobacter sp. AnTP99 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x remove 463,584 - BWI76_RS02250 0.48 -0.9 463,609 - BWI76_RS02250 0.50 +0.4 463,626 - BWI76_RS02250 0.51 -0.1 463,646 + BWI76_RS02250 0.53 +0.2 463,730 + BWI76_RS02250 0.58 -0.1 463,738 - BWI76_RS02250 0.59 +0.1 463,840 - BWI76_RS02250 0.65 +0.7 463,999 + BWI76_RS02250 0.76 -0.2 464,047 - BWI76_RS02250 0.79 -0.8 464,069 + BWI76_RS02250 0.81 -0.6 464,069 + BWI76_RS02250 0.81 -0.4 464,096 + BWI76_RS02250 0.83 +1.0 464,151 + BWI76_RS02250 0.86 +0.5 464,326 - +0.4 464,447 - -1.2 464,614 + BWI76_RS02255 0.44 +0.8 464,619 - BWI76_RS02255 0.45 +0.9 464,632 - BWI76_RS02255 0.50 +0.5 464,683 + BWI76_RS02255 0.66 -0.2 464,801 + -0.0 464,831 + +0.1 464,934 + BWI76_RS02260 0.16 +1.2 464,934 + BWI76_RS02260 0.16 -0.2 465,097 - BWI76_RS02260 0.34 +0.3 465,279 + BWI76_RS02260 0.54 +0.9 465,435 + BWI76_RS02260 0.71 -0.2 465,437 + BWI76_RS02260 0.71 +0.3 465,445 - BWI76_RS02260 0.72 +0.4 465,536 - BWI76_RS02260 0.82 -0.4 465,608 - BWI76_RS02260 0.89 -0.8 465,647 - +0.7 465,647 - -0.2 465,647 - -0.4
Or see this region's nucleotide sequence