Experiment: RCH2_defined_noCarbon with Mixed culture; Arthrobacter sp. AnTP99 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS01605 and BWI76_RS01610 overlap by 4 nucleotides BWI76_RS01610 and BWI76_RS01615 are separated by 15 nucleotides
BWI76_RS01605: BWI76_RS01605 - transcriptional regulatory protein ZraR, at 325,193 to 326,524
_RS01605
BWI76_RS01610: BWI76_RS01610 - phosphoribosylamine--glycine ligase, at 326,521 to 327,813
_RS01610
BWI76_RS01615: BWI76_RS01615 - bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase, at 327,829 to 329,418
_RS01615
Position (kb) 326
327
328 Strain fitness (log2 ratio) -6
-5
-4
-3
-2
-1
0
1 at 325.528 kb on + strand, within BWI76_RS01605 at 325.606 kb on + strand, within BWI76_RS01605 at 325.643 kb on + strand, within BWI76_RS01605 at 325.736 kb on - strand, within BWI76_RS01605 at 325.812 kb on + strand, within BWI76_RS01605 at 325.901 kb on - strand, within BWI76_RS01605 at 325.976 kb on + strand, within BWI76_RS01605 at 326.186 kb on - strand at 326.212 kb on - strand, within BWI76_RS01605 at 326.233 kb on - strand, within BWI76_RS01605 at 326.669 kb on - strand, within BWI76_RS01610 at 326.977 kb on - strand, within BWI76_RS01610 at 327.022 kb on - strand, within BWI76_RS01610 at 327.081 kb on + strand, within BWI76_RS01610 at 327.113 kb on - strand, within BWI76_RS01610 at 327.206 kb on + strand, within BWI76_RS01610 at 327.516 kb on + strand, within BWI76_RS01610 at 327.586 kb on - strand, within BWI76_RS01610 at 327.628 kb on + strand, within BWI76_RS01610 at 327.648 kb on - strand, within BWI76_RS01610 at 327.712 kb on - strand at 327.862 kb on - strand at 328.002 kb on + strand, within BWI76_RS01615 at 328.075 kb on + strand, within BWI76_RS01615 at 328.100 kb on + strand, within BWI76_RS01615 at 328.127 kb on + strand, within BWI76_RS01615 at 328.135 kb on - strand, within BWI76_RS01615 at 328.249 kb on + strand, within BWI76_RS01615 at 328.268 kb on + strand, within BWI76_RS01615 at 328.357 kb on + strand, within BWI76_RS01615 at 328.543 kb on + strand, within BWI76_RS01615 at 328.608 kb on - strand, within BWI76_RS01615 at 328.639 kb on - strand, within BWI76_RS01615 at 328.689 kb on - strand, within BWI76_RS01615 at 328.739 kb on + strand, within BWI76_RS01615 at 328.775 kb on - strand, within BWI76_RS01615
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_noCarbon with Mixed culture; Arthrobacter sp. AnTP99 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x remove 325,528 + BWI76_RS01605 0.25 +0.6 325,606 + BWI76_RS01605 0.31 +0.4 325,643 + BWI76_RS01605 0.34 +1.2 325,736 - BWI76_RS01605 0.41 -0.1 325,812 + BWI76_RS01605 0.46 -0.1 325,901 - BWI76_RS01605 0.53 +1.6 325,976 + BWI76_RS01605 0.59 +0.4 326,186 - +1.2 326,212 - BWI76_RS01605 0.77 +0.7 326,233 - BWI76_RS01605 0.78 +0.2 326,669 - BWI76_RS01610 0.11 -2.3 326,977 - BWI76_RS01610 0.35 -3.9 327,022 - BWI76_RS01610 0.39 -4.5 327,081 + BWI76_RS01610 0.43 -5.0 327,113 - BWI76_RS01610 0.46 -1.7 327,206 + BWI76_RS01610 0.53 -5.9 327,516 + BWI76_RS01610 0.77 -3.0 327,586 - BWI76_RS01610 0.82 -3.3 327,628 + BWI76_RS01610 0.86 -4.0 327,648 - BWI76_RS01610 0.87 -3.5 327,712 - -2.6 327,862 - -1.2 328,002 + BWI76_RS01615 0.11 -3.0 328,075 + BWI76_RS01615 0.15 -4.3 328,100 + BWI76_RS01615 0.17 -0.4 328,127 + BWI76_RS01615 0.19 -5.4 328,135 - BWI76_RS01615 0.19 -3.0 328,249 + BWI76_RS01615 0.26 -2.8 328,268 + BWI76_RS01615 0.28 -3.6 328,357 + BWI76_RS01615 0.33 -5.3 328,543 + BWI76_RS01615 0.45 -1.6 328,608 - BWI76_RS01615 0.49 -4.4 328,639 - BWI76_RS01615 0.51 -3.8 328,689 - BWI76_RS01615 0.54 -2.1 328,739 + BWI76_RS01615 0.57 -0.8 328,775 - BWI76_RS01615 0.59 -1.5
Or see this region's nucleotide sequence