Experiment: RCH2_defined_noCarbon with Mixed culture; Arthrobacter sp. AnTP99 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS00735 and BWI76_RS00740 are separated by 60 nucleotides BWI76_RS00740 and BWI76_RS00745 are separated by 92 nucleotides
BWI76_RS00735: BWI76_RS00735 - ATP-dependent 6-phosphofructokinase, at 149,499 to 150,461
_RS00735
BWI76_RS00740: BWI76_RS00740 - ribonuclease E activity regulator RraA, at 150,522 to 151,007
_RS00740
BWI76_RS00745: BWI76_RS00745 - 1,4-dihydroxy-2-naphthoate polyprenyltransferase, at 151,100 to 152,026
_RS00745
Position (kb) 150
151
152 Strain fitness (log2 ratio) -1
0
1
2
3 at 150.559 kb on - strand at 150.683 kb on - strand, within BWI76_RS00740 at 150.827 kb on + strand, within BWI76_RS00740 at 150.827 kb on - strand, within BWI76_RS00740 at 150.867 kb on - strand, within BWI76_RS00740 at 150.867 kb on - strand, within BWI76_RS00740 at 150.963 kb on - strand at 151.169 kb on - strand at 151.176 kb on - strand at 151.316 kb on - strand, within BWI76_RS00745 at 151.316 kb on - strand, within BWI76_RS00745 at 151.443 kb on + strand, within BWI76_RS00745 at 151.489 kb on + strand, within BWI76_RS00745 at 151.489 kb on + strand, within BWI76_RS00745 at 151.497 kb on - strand, within BWI76_RS00745 at 151.497 kb on - strand, within BWI76_RS00745
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_noCarbon with Mixed culture; Arthrobacter sp. AnTP99 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x remove 150,559 - +2.8 150,683 - BWI76_RS00740 0.33 -0.5 150,827 + BWI76_RS00740 0.63 +0.9 150,827 - BWI76_RS00740 0.63 +0.4 150,867 - BWI76_RS00740 0.71 +0.6 150,867 - BWI76_RS00740 0.71 +0.9 150,963 - -0.3 151,169 - +0.2 151,176 - +1.2 151,316 - BWI76_RS00745 0.23 +0.2 151,316 - BWI76_RS00745 0.23 +0.1 151,443 + BWI76_RS00745 0.37 -0.8 151,489 + BWI76_RS00745 0.42 +0.2 151,489 + BWI76_RS00745 0.42 +0.1 151,497 - BWI76_RS00745 0.43 -0.8 151,497 - BWI76_RS00745 0.43 -0.8
Or see this region's nucleotide sequence