Experiment: Lactitol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa1371 and SMa1374 are separated by 2 nucleotides SMa1374 and SMa1373 overlap by 1 nucleotides SMa1373 and SMa1375 are separated by 78 nucleotides
SMa1371: SMa1371 - ABC transporter ATP-binding protein, at 753,652 to 754,632
SMa1371
SMa1374: SMa1374 - ABC transporter permease, at 754,635 to 755,594
SMa1374
SMa1373: SMa1373 - ABC transporter permease, at 755,594 to 756,514
SMa1373
SMa1375: SMa1375 - ABC transporter substrate-binding protein, at 756,593 to 758,077
SMa1375
Position (kb) 755
756
757 Strain fitness (log2 ratio) -2
-1
0
1
2 at 754.817 kb on - strand, within SMa1374 at 754.817 kb on - strand, within SMa1374 at 754.887 kb on + strand, within SMa1374 at 755.023 kb on + strand, within SMa1374 at 755.071 kb on + strand, within SMa1374 at 755.157 kb on + strand, within SMa1374 at 755.157 kb on + strand, within SMa1374 at 755.157 kb on + strand, within SMa1374 at 755.157 kb on + strand, within SMa1374 at 755.157 kb on + strand, within SMa1374 at 755.158 kb on - strand, within SMa1374 at 755.346 kb on - strand, within SMa1374 at 755.434 kb on + strand, within SMa1374 at 755.435 kb on - strand, within SMa1374 at 755.435 kb on - strand, within SMa1374 at 755.819 kb on - strand, within SMa1373 at 755.819 kb on - strand, within SMa1373 at 755.846 kb on + strand, within SMa1373 at 755.851 kb on + strand, within SMa1373 at 755.852 kb on - strand, within SMa1373 at 755.866 kb on + strand, within SMa1373 at 755.866 kb on + strand, within SMa1373 at 755.907 kb on + strand, within SMa1373 at 755.907 kb on + strand, within SMa1373 at 755.907 kb on + strand, within SMa1373 at 755.908 kb on - strand, within SMa1373 at 755.983 kb on + strand, within SMa1373 at 755.984 kb on - strand, within SMa1373 at 756.514 kb on + strand at 756.514 kb on + strand at 756.514 kb on + strand at 756.514 kb on + strand at 756.515 kb on - strand at 756.515 kb on - strand at 756.573 kb on + strand at 756.574 kb on - strand at 756.574 kb on - strand at 756.595 kb on - strand at 756.602 kb on + strand at 756.672 kb on + strand at 756.672 kb on + strand at 756.672 kb on + strand at 756.705 kb on + strand at 756.705 kb on + strand at 756.706 kb on - strand at 756.706 kb on - strand at 756.706 kb on - strand at 757.126 kb on - strand, within SMa1375 at 757.126 kb on - strand, within SMa1375 at 757.195 kb on - strand, within SMa1375 at 757.195 kb on - strand, within SMa1375 at 757.273 kb on + strand, within SMa1375 at 757.274 kb on - strand, within SMa1375
Per-strain Table
Position Strand Gene LocusTag Fraction Lactitol (C) remove 754,817 - SMa1374 0.19 +1.0 754,817 - SMa1374 0.19 +0.4 754,887 + SMa1374 0.26 +0.1 755,023 + SMa1374 0.40 +0.4 755,071 + SMa1374 0.45 +0.1 755,157 + SMa1374 0.54 +0.6 755,157 + SMa1374 0.54 +0.5 755,157 + SMa1374 0.54 -2.1 755,157 + SMa1374 0.54 +0.5 755,157 + SMa1374 0.54 -0.2 755,158 - SMa1374 0.54 +0.1 755,346 - SMa1374 0.74 -0.2 755,434 + SMa1374 0.83 +0.6 755,435 - SMa1374 0.83 -0.0 755,435 - SMa1374 0.83 -0.0 755,819 - SMa1373 0.24 -1.2 755,819 - SMa1373 0.24 +0.3 755,846 + SMa1373 0.27 -1.5 755,851 + SMa1373 0.28 +0.2 755,852 - SMa1373 0.28 +0.8 755,866 + SMa1373 0.30 -0.0 755,866 + SMa1373 0.30 -1.0 755,907 + SMa1373 0.34 -0.1 755,907 + SMa1373 0.34 -0.0 755,907 + SMa1373 0.34 -0.9 755,908 - SMa1373 0.34 -0.4 755,983 + SMa1373 0.42 +0.6 755,984 - SMa1373 0.42 -0.8 756,514 + +0.1 756,514 + +1.1 756,514 + +0.4 756,514 + -0.2 756,515 - +0.5 756,515 - +1.0 756,573 + +0.6 756,574 - +0.2 756,574 - +0.0 756,595 - +1.0 756,602 + -1.0 756,672 + -1.5 756,672 + +0.8 756,672 + -0.9 756,705 + +0.2 756,705 + -0.3 756,706 - +1.9 756,706 - +0.6 756,706 - +0.2 757,126 - SMa1375 0.36 -0.3 757,126 - SMa1375 0.36 +0.6 757,195 - SMa1375 0.41 +0.4 757,195 - SMa1375 0.41 +1.4 757,273 + SMa1375 0.46 -0.3 757,274 - SMa1375 0.46 -0.0
Or see this region's nucleotide sequence