Experiment: Lactitol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20755 and SM_b20756 are separated by 12 nucleotides SM_b20756 and SM_b20757 are separated by 225 nucleotides
SM_b20755: SM_b20755 - propionyl-CoA carboxylase subunit beta, at 1,545,196 to 1,546,728
_b20755
SM_b20756: SM_b20756 - propionyl-CoA carboxylase subunit alpha, at 1,546,741 to 1,548,753
_b20756
SM_b20757: SM_b20757 - methylmalonyl-CoA mutase, at 1,548,979 to 1,551,117
_b20757
Position (kb)
1546
1547
1548
1549 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1545.760 kb on + strand, within SM_b20755 at 1545.760 kb on + strand, within SM_b20755 at 1545.761 kb on - strand, within SM_b20755 at 1546.011 kb on - strand, within SM_b20755 at 1546.036 kb on + strand, within SM_b20755 at 1546.037 kb on - strand, within SM_b20755 at 1546.351 kb on + strand, within SM_b20755 at 1546.352 kb on - strand, within SM_b20755 at 1546.352 kb on - strand, within SM_b20755 at 1546.399 kb on + strand, within SM_b20755 at 1546.400 kb on - strand, within SM_b20755 at 1546.411 kb on + strand, within SM_b20755 at 1546.453 kb on + strand, within SM_b20755 at 1546.453 kb on + strand, within SM_b20755 at 1546.454 kb on - strand, within SM_b20755 at 1546.454 kb on - strand, within SM_b20755 at 1546.513 kb on + strand, within SM_b20755 at 1546.514 kb on - strand, within SM_b20755 at 1546.614 kb on - strand at 1546.928 kb on - strand at 1546.928 kb on - strand at 1546.928 kb on - strand at 1546.944 kb on + strand, within SM_b20756 at 1547.152 kb on - strand, within SM_b20756 at 1547.152 kb on - strand, within SM_b20756 at 1547.410 kb on - strand, within SM_b20756 at 1547.416 kb on + strand, within SM_b20756 at 1547.416 kb on + strand, within SM_b20756 at 1547.417 kb on - strand, within SM_b20756 at 1547.417 kb on - strand, within SM_b20756 at 1547.909 kb on - strand, within SM_b20756 at 1547.909 kb on - strand, within SM_b20756 at 1547.911 kb on + strand, within SM_b20756 at 1547.911 kb on + strand, within SM_b20756 at 1547.912 kb on - strand, within SM_b20756 at 1548.086 kb on - strand, within SM_b20756 at 1548.313 kb on + strand, within SM_b20756 at 1548.313 kb on + strand, within SM_b20756 at 1548.313 kb on + strand, within SM_b20756 at 1548.314 kb on - strand, within SM_b20756 at 1548.314 kb on - strand, within SM_b20756 at 1548.440 kb on + strand, within SM_b20756 at 1548.658 kb on - strand at 1548.816 kb on + strand at 1549.178 kb on - strand at 1549.208 kb on - strand, within SM_b20757 at 1549.246 kb on + strand, within SM_b20757 at 1549.570 kb on + strand, within SM_b20757 at 1549.570 kb on + strand, within SM_b20757 at 1549.571 kb on - strand, within SM_b20757 at 1549.576 kb on + strand, within SM_b20757 at 1549.577 kb on - strand at 1549.623 kb on + strand, within SM_b20757 at 1549.738 kb on + strand, within SM_b20757
Per-strain Table
Position Strand Gene LocusTag Fraction Lactitol (C) remove 1,545,760 + SM_b20755 0.37 +0.8 1,545,760 + SM_b20755 0.37 -1.0 1,545,761 - SM_b20755 0.37 -0.2 1,546,011 - SM_b20755 0.53 -0.8 1,546,036 + SM_b20755 0.55 +1.4 1,546,037 - SM_b20755 0.55 +1.5 1,546,351 + SM_b20755 0.75 -0.5 1,546,352 - SM_b20755 0.75 -0.7 1,546,352 - SM_b20755 0.75 -0.8 1,546,399 + SM_b20755 0.78 -0.3 1,546,400 - SM_b20755 0.79 +0.7 1,546,411 + SM_b20755 0.79 -0.1 1,546,453 + SM_b20755 0.82 +1.7 1,546,453 + SM_b20755 0.82 -0.3 1,546,454 - SM_b20755 0.82 -0.3 1,546,454 - SM_b20755 0.82 -0.8 1,546,513 + SM_b20755 0.86 -0.8 1,546,514 - SM_b20755 0.86 -1.3 1,546,614 - -0.7 1,546,928 - +0.0 1,546,928 - -0.2 1,546,928 - -1.0 1,546,944 + SM_b20756 0.10 +0.9 1,547,152 - SM_b20756 0.20 -0.4 1,547,152 - SM_b20756 0.20 -0.3 1,547,410 - SM_b20756 0.33 -0.8 1,547,416 + SM_b20756 0.34 -0.4 1,547,416 + SM_b20756 0.34 -0.2 1,547,417 - SM_b20756 0.34 +0.2 1,547,417 - SM_b20756 0.34 +0.3 1,547,909 - SM_b20756 0.58 -0.7 1,547,909 - SM_b20756 0.58 -0.2 1,547,911 + SM_b20756 0.58 -1.2 1,547,911 + SM_b20756 0.58 -0.9 1,547,912 - SM_b20756 0.58 +0.3 1,548,086 - SM_b20756 0.67 +0.5 1,548,313 + SM_b20756 0.78 -0.2 1,548,313 + SM_b20756 0.78 +2.5 1,548,313 + SM_b20756 0.78 +1.0 1,548,314 - SM_b20756 0.78 -0.9 1,548,314 - SM_b20756 0.78 -0.1 1,548,440 + SM_b20756 0.84 -1.2 1,548,658 - -0.2 1,548,816 + -0.9 1,549,178 - -0.3 1,549,208 - SM_b20757 0.11 -0.1 1,549,246 + SM_b20757 0.12 -0.7 1,549,570 + SM_b20757 0.28 -1.6 1,549,570 + SM_b20757 0.28 -1.6 1,549,571 - SM_b20757 0.28 -1.3 1,549,576 + SM_b20757 0.28 -1.4 1,549,577 - +2.5 1,549,623 + SM_b20757 0.30 -0.5 1,549,738 + SM_b20757 0.35 -2.1
Or see this region's nucleotide sequence