Experiment: Lactitol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20557 and SM_b20558 are separated by 720 nucleotides
SM_b20557: SM_b20557 - hypothetical protein, at 582,372 to 582,707
_b20557
SM_b20558: SM_b20558 - hypothetical protein, at 583,428 to 583,838
_b20558
Position (kb) 582
583 Strain fitness (log2 ratio) -1
0
1
2 at 581.418 kb on + strand at 581.472 kb on + strand at 581.472 kb on + strand at 581.472 kb on + strand at 581.473 kb on - strand at 581.473 kb on - strand at 581.473 kb on - strand at 581.473 kb on - strand at 581.659 kb on + strand at 581.660 kb on - strand at 581.660 kb on - strand at 581.708 kb on + strand at 581.709 kb on - strand at 581.911 kb on + strand at 581.912 kb on - strand at 581.912 kb on - strand at 581.912 kb on - strand at 581.914 kb on + strand at 581.934 kb on - strand at 582.037 kb on + strand at 582.037 kb on + strand at 582.037 kb on + strand at 582.038 kb on - strand at 582.077 kb on + strand at 582.108 kb on + strand at 582.109 kb on - strand at 582.109 kb on - strand at 582.109 kb on - strand at 582.114 kb on + strand at 582.115 kb on - strand at 582.120 kb on + strand at 582.121 kb on - strand at 582.121 kb on - strand at 582.132 kb on + strand at 582.132 kb on + strand at 582.132 kb on + strand at 582.133 kb on - strand at 582.135 kb on + strand at 582.135 kb on + strand at 582.136 kb on - strand at 582.136 kb on - strand at 582.162 kb on + strand at 582.253 kb on - strand at 582.253 kb on - strand at 582.284 kb on + strand at 582.285 kb on - strand at 582.301 kb on + strand at 582.302 kb on - strand at 582.302 kb on - strand at 582.305 kb on + strand at 582.306 kb on - strand at 582.306 kb on - strand at 582.484 kb on + strand, within SM_b20557 at 582.485 kb on - strand, within SM_b20557 at 582.488 kb on + strand, within SM_b20557 at 582.519 kb on + strand, within SM_b20557 at 582.520 kb on - strand, within SM_b20557 at 582.537 kb on + strand, within SM_b20557 at 582.537 kb on + strand, within SM_b20557 at 582.537 kb on + strand, within SM_b20557 at 582.538 kb on - strand, within SM_b20557 at 582.538 kb on - strand, within SM_b20557 at 582.564 kb on + strand, within SM_b20557 at 582.565 kb on - strand, within SM_b20557 at 582.565 kb on - strand, within SM_b20557 at 582.740 kb on + strand at 582.740 kb on + strand at 582.827 kb on + strand at 582.827 kb on + strand at 582.851 kb on + strand at 582.851 kb on + strand at 582.851 kb on + strand at 582.852 kb on - strand at 582.852 kb on - strand at 582.887 kb on - strand at 582.918 kb on + strand at 582.923 kb on + strand at 582.955 kb on - strand at 582.964 kb on + strand at 582.979 kb on - strand at 583.075 kb on + strand at 583.136 kb on + strand at 583.190 kb on - strand at 583.190 kb on - strand at 583.429 kb on + strand at 583.429 kb on + strand at 583.456 kb on + strand at 583.456 kb on + strand at 583.540 kb on - strand, within SM_b20558 at 583.602 kb on - strand, within SM_b20558 at 583.602 kb on - strand, within SM_b20558 at 583.602 kb on - strand, within SM_b20558 at 583.663 kb on - strand, within SM_b20558 at 583.663 kb on - strand, within SM_b20558 at 583.663 kb on - strand, within SM_b20558 at 583.663 kb on - strand, within SM_b20558
Per-strain Table
Position Strand Gene LocusTag Fraction Lactitol (C) remove 581,418 + +1.9 581,472 + -0.8 581,472 + +1.0 581,472 + +0.7 581,473 - -0.3 581,473 - -0.1 581,473 - -1.0 581,473 - -0.1 581,659 + +0.3 581,660 - +0.5 581,660 - -0.3 581,708 + +0.1 581,709 - +0.1 581,911 + +0.8 581,912 - -0.1 581,912 - +0.2 581,912 - -0.7 581,914 + +2.4 581,934 - +0.2 582,037 + +0.2 582,037 + +0.1 582,037 + -0.7 582,038 - -1.2 582,077 + -0.5 582,108 + +0.5 582,109 - -0.4 582,109 - +0.1 582,109 - -0.3 582,114 + +1.0 582,115 - +0.1 582,120 + -1.6 582,121 - -0.1 582,121 - +0.0 582,132 + +0.5 582,132 + +1.5 582,132 + +0.6 582,133 - +0.7 582,135 + -1.3 582,135 + -0.6 582,136 - +2.4 582,136 - +0.0 582,162 + -0.0 582,253 - -1.0 582,253 - -0.3 582,284 + +1.0 582,285 - +0.2 582,301 + -0.9 582,302 - -1.4 582,302 - -0.2 582,305 + +0.2 582,306 - +2.4 582,306 - -0.1 582,484 + SM_b20557 0.33 -0.4 582,485 - SM_b20557 0.34 -0.6 582,488 + SM_b20557 0.35 -1.2 582,519 + SM_b20557 0.44 -0.6 582,520 - SM_b20557 0.44 -0.5 582,537 + SM_b20557 0.49 -0.5 582,537 + SM_b20557 0.49 -0.2 582,537 + SM_b20557 0.49 -0.3 582,538 - SM_b20557 0.49 -0.6 582,538 - SM_b20557 0.49 +1.1 582,564 + SM_b20557 0.57 -1.3 582,565 - SM_b20557 0.57 -1.4 582,565 - SM_b20557 0.57 -0.1 582,740 + -0.3 582,740 + -0.0 582,827 + +1.0 582,827 + -0.0 582,851 + -0.5 582,851 + -0.6 582,851 + +0.1 582,852 - -0.4 582,852 - +0.5 582,887 - -0.0 582,918 + +1.3 582,923 + +1.0 582,955 - +1.0 582,964 + +0.5 582,979 - -0.2 583,075 + +2.1 583,136 + +0.2 583,190 - -0.2 583,190 - -0.8 583,429 + +1.0 583,429 + -0.4 583,456 + +0.0 583,456 + -0.2 583,540 - SM_b20558 0.27 +1.0 583,602 - SM_b20558 0.42 -0.3 583,602 - SM_b20558 0.42 -0.3 583,602 - SM_b20558 0.42 +1.6 583,663 - SM_b20558 0.57 +0.8 583,663 - SM_b20558 0.57 +0.9 583,663 - SM_b20558 0.57 -0.4 583,663 - SM_b20558 0.57 -0.6
Or see this region's nucleotide sequence