Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS21625

Experiment: RCH2_defined_noCarbon with Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_noCarbon with Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x
4,527,200	-		BWI76_RS21620	0.11	+0.1
4,527,218	-		BWI76_RS21620	0.14	+0.8
4,527,223	-		BWI76_RS21620	0.14	-0.3
4,527,250	+		BWI76_RS21620	0.18	-0.8
4,527,258	-		BWI76_RS21620	0.19	+0.3
4,527,258	-		BWI76_RS21620	0.19	-0.3
4,527,281	-		BWI76_RS21620	0.22	-0.4
4,527,289	-		BWI76_RS21620	0.23	-0.3
4,527,321	-		BWI76_RS21620	0.27	+0.1
4,527,335	-		BWI76_RS21620	0.29	+0.3
4,527,350	-		BWI76_RS21620	0.31	+0.1
4,527,355	+		BWI76_RS21620	0.32	-0.8
4,527,515	+		BWI76_RS21620	0.53	+0.2
4,527,523	-		BWI76_RS21620	0.54	+0.1
4,527,534	+		BWI76_RS21620	0.55	-0.3
4,527,534	+		BWI76_RS21620	0.55	-0.9
4,527,542	-		BWI76_RS21620	0.56	-0.8
4,527,556	+		BWI76_RS21620	0.58	-0.8
4,527,574	-		BWI76_RS21620	0.60	-0.0
4,527,583	+		BWI76_RS21620	0.62	-0.2
4,527,583	+		BWI76_RS21620	0.62	-0.4
4,527,591	-		BWI76_RS21620	0.63	-0.6
4,527,674	+		BWI76_RS21620	0.73	-1.3
4,527,704	-		BWI76_RS21620	0.77	-0.3
4,527,782	+		BWI76_RS21620	0.88	-1.5
4,527,782	+				+0.6
4,527,790	-		BWI76_RS21620	0.89	-0.1
4,527,947	+				+0.5
4,527,947	+				+1.1
4,527,947	+				-0.8
4,527,947	+				-0.4
4,527,947	+				-0.5
4,527,947	+				-1.8
4,527,947	+				-2.4
4,527,947	+				-0.2
4,527,950	-				+2.1
4,527,950	-				-0.5
4,527,955	-				+0.3
4,527,958	+				-1.7
4,527,961	-				-0.8
4,528,106	+				+0.5
4,528,106	+				+0.4
4,528,106	+				+2.1
4,528,106	+				-0.1
4,528,106	+				+0.1
4,528,108	+				+0.2
4,528,114	-				-0.1
4,528,114	-				+0.1
4,528,158	+				-0.0
4,528,161	-				+1.1
4,528,164	+				+1.1
4,528,164	+				+0.3
4,528,164	+				+0.1
4,528,164	+				+0.9
4,528,166	-				-1.3
4,528,171	-				+0.4
4,528,172	-				+0.1
4,528,186	+		BWI76_RS21625	0.16	-2.8
4,528,270	+		BWI76_RS21625	0.56	-0.4
4,528,270	+		BWI76_RS21625	0.56	+0.6
4,528,270	+		BWI76_RS21625	0.56	+1.1
4,528,270	+		BWI76_RS21625	0.56	-1.9
4,528,278	-		BWI76_RS21625	0.60	+0.1
4,528,278	-		BWI76_RS21625	0.60	+1.1
4,528,278	-		BWI76_RS21625	0.60	-0.2
4,528,285	+		BWI76_RS21625	0.63	-2.5
4,528,293	-		BWI76_RS21625	0.67	+0.4
4,528,293	-		BWI76_RS21625	0.67	-0.1
4,528,293	-		BWI76_RS21625	0.67	-1.5
4,528,296	-		BWI76_RS21625	0.69	-0.5
4,528,298	-		BWI76_RS21625	0.70	-0.9
4,528,298	-		BWI76_RS21625	0.70	-0.5
4,528,298	-		BWI76_RS21625	0.70	-0.0
4,528,298	-		BWI76_RS21625	0.70	-0.7
4,528,298	-		BWI76_RS21625	0.70	-1.2
4,528,309	+		BWI76_RS21625	0.75	-1.1
4,528,310	+		BWI76_RS21625	0.75	+1.1
4,528,315	+		BWI76_RS21625	0.78	-1.7
4,528,315	+		BWI76_RS21625	0.78	+0.5
4,528,315	+		BWI76_RS21625	0.78	-3.3
4,528,315	+		BWI76_RS21625	0.78	-2.4
4,528,315	+		BWI76_RS21625	0.78	-0.6
4,528,317	-		BWI76_RS21625	0.79	-1.3
4,528,317	-		BWI76_RS21625	0.79	-0.3
4,528,318	-		BWI76_RS21625	0.79	-0.2
4,528,318	-		BWI76_RS21625	0.79	-0.5
4,528,318	-		BWI76_RS21625	0.79	+0.6
4,528,320	+				+1.1
4,528,320	+		BWI76_RS21625	0.80	-1.5
4,528,320	+		BWI76_RS21625	0.80	+0.1
4,528,323	-		BWI76_RS21625	0.81	-0.9
4,528,327	+		BWI76_RS21625	0.83	-0.4
4,528,328	-		BWI76_RS21625	0.84	+0.3
4,528,328	-		BWI76_RS21625	0.84	-1.7
4,528,346	+				+0.1
4,528,346	+				+0.7
4,528,352	+				-1.5
4,528,354	-				+0.5
4,528,399	-				+1.1
4,528,403	+				-1.2
4,528,403	+				-0.7
4,528,403	+				-0.9
4,528,403	+				-2.3
4,528,403	+				+0.1
4,528,411	-				-1.5
4,528,411	-				-0.8
4,528,411	-				+0.1
4,528,411	-				-0.5
4,528,411	-				-0.9
4,528,411	-				-1.3
4,528,423	+				-0.9
4,528,423	+				-0.3
4,528,423	+				+0.2
4,528,540	+				-1.8
4,528,558	+				-1.0
4,528,577	-				+1.1
4,528,579	+				-0.9
4,528,602	+				-2.1
4,528,602	+				-1.3
4,528,602	+				+0.1
4,528,602	+				-0.9
4,528,602	+				-0.7
4,528,602	+				-1.2
4,528,610	-				+0.1
4,528,632	+				-1.4
4,528,645	+				+2.1
4,528,650	+				+1.1
4,528,650	+				-1.1
4,528,658	-				-0.5
4,528,659	+				-0.9
4,528,660	+				-1.3
4,528,665	+				-0.8
4,528,665	+				+0.4
4,528,665	+				-0.9
4,528,665	+				+0.5
4,528,665	+				-0.9
4,528,665	+				+0.1
4,528,665	+				-0.4
4,528,665	+				-2.3
4,528,665	+				+0.1
4,528,665	+				-0.5
4,528,665	+				+1.1
4,528,665	+				-1.8
4,528,665	+				+0.2
4,528,665	+				-0.4
4,528,665	+				-0.2
4,528,665	+				-0.9
4,528,665	+				-0.2
4,528,665	+				-0.7
4,528,665	+				+2.1
4,528,665	+				-1.8
4,528,665	+				-0.4
4,528,665	+				-0.5
4,528,665	+				-0.5
4,528,665	+				+0.8
4,528,665	+				-0.4
4,528,665	+				-1.9
4,528,665	+				-0.9
4,528,665	+				+0.1
4,528,665	+				-1.2
4,528,665	+				-0.7
4,528,665	+				-0.4
4,528,665	+				-1.6
4,528,665	+				-0.8
4,528,665	+				-0.3
4,528,665	+				-0.7
4,528,667	+				-1.5
4,528,667	-				-1.5
4,528,668	-				+0.2
4,528,668	-				-0.2
4,528,673	-				-2.3
4,528,673	-				-1.5
4,528,673	-				-0.3
4,528,673	-				+0.0
4,528,673	-				-1.5
4,528,673	-				+1.1
4,528,673	-				-1.9
4,528,673	-				-2.6
4,528,673	-				-0.6
4,528,673	-				-0.5
4,528,673	-				+0.2
4,528,673	-				+0.1
4,528,673	-				-0.0
4,528,673	-				-2.3
4,528,707	+				-0.5
4,528,810	+		BWI76_RS21630	0.14	-1.1
4,528,818	-		BWI76_RS21630	0.14	-0.2
4,528,820	+		BWI76_RS21630	0.14	+0.1
4,528,838	+		BWI76_RS21630	0.16	+0.1
4,528,840	+		BWI76_RS21630	0.16	-0.9
4,528,840	+		BWI76_RS21630	0.16	-0.3
4,528,843	-		BWI76_RS21630	0.16	+1.3
4,528,845	+		BWI76_RS21630	0.16	+0.8
4,528,849	+		BWI76_RS21630	0.16	-0.5
4,528,856	+		BWI76_RS21630	0.17	-1.0
4,528,875	+		BWI76_RS21630	0.18	-1.0
4,528,952	+		BWI76_RS21630	0.23	+0.6
4,528,956	+		BWI76_RS21630	0.23	-0.0
4,528,956	+		BWI76_RS21630	0.23	+0.2
4,528,961	+		BWI76_RS21630	0.23	+0.6
4,528,961	+		BWI76_RS21630	0.23	-1.1
4,528,964	-		BWI76_RS21630	0.23	+0.2
4,529,019	+		BWI76_RS21630	0.27	+0.6
4,529,019	+		BWI76_RS21630	0.27	-0.2
4,529,020	-		BWI76_RS21630	0.27	+0.4
4,529,027	-		BWI76_RS21630	0.27	+0.0
4,529,027	-				+1.1
4,529,042	+		BWI76_RS21630	0.28	+0.2
4,529,042	+		BWI76_RS21630	0.28	+0.1
4,529,050	-		BWI76_RS21630	0.29	-0.6
4,529,100	+		BWI76_RS21630	0.32	+0.1
4,529,101	+		BWI76_RS21630	0.32	-1.7
4,529,101	+		BWI76_RS21630	0.32	-0.6
4,529,101	+		BWI76_RS21630	0.32	-0.4
4,529,108	-		BWI76_RS21630	0.32	+0.1
4,529,109	-		BWI76_RS21630	0.32	-1.0
4,529,136	-		BWI76_RS21630	0.34	-0.1
4,529,138	+		BWI76_RS21630	0.34	+0.4
4,529,157	-		BWI76_RS21630	0.35	-0.3
4,529,158	+		BWI76_RS21630	0.35	+0.1
4,529,158	+		BWI76_RS21630	0.35	+0.3
4,529,158	+		BWI76_RS21630	0.35	+0.5
4,529,159	-		BWI76_RS21630	0.35	+0.1
4,529,166	-		BWI76_RS21630	0.36	-1.3
4,529,173	+		BWI76_RS21630	0.36	+0.1
4,529,179	-		BWI76_RS21630	0.37	+1.1
4,529,187	+		BWI76_RS21630	0.37	-1.3
4,529,189	+		BWI76_RS21630	0.37	-0.1
4,529,253	+		BWI76_RS21630	0.41	-1.9
4,529,254	+		BWI76_RS21630	0.41	+1.1
4,529,261	-		BWI76_RS21630	0.42	-0.9
4,529,262	-		BWI76_RS21630	0.42	-0.9
4,529,271	-		BWI76_RS21630	0.42	+0.1
4,529,299	+		BWI76_RS21630	0.44	+0.2
4,529,307	-		BWI76_RS21630	0.45	+0.3
4,529,308	+		BWI76_RS21630	0.45	-0.3
4,529,317	+		BWI76_RS21630	0.45	-2.3
4,529,329	+		BWI76_RS21630	0.46	-0.5