Experiment: RCH2_defined_noCarbon with Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS18170 and BWI76_RS18175 are separated by 268 nucleotides BWI76_RS18175 and BWI76_RS18180 overlap by 4 nucleotides BWI76_RS18180 and BWI76_RS18185 are separated by 53 nucleotides
BWI76_RS18170: BWI76_RS18170 - aspartate--tRNA ligase, at 3,774,895 to 3,776,682
_RS18170
BWI76_RS18175: BWI76_RS18175 - hydrolase, at 3,776,951 to 3,777,517
_RS18175
BWI76_RS18180: BWI76_RS18180 - hypothetical protein, at 3,777,514 to 3,778,332
_RS18180
BWI76_RS18185: BWI76_RS18185 - membrane protein, at 3,778,386 to 3,778,781
_RS18185
Position (kb) 3776
3777
3778 Strain fitness (log2 ratio) -1
0
1
2 at 3776.813 kb on + strand at 3776.909 kb on + strand at 3776.914 kb on + strand at 3776.943 kb on + strand at 3777.093 kb on + strand, within BWI76_RS18175 at 3777.177 kb on + strand, within BWI76_RS18175 at 3777.284 kb on - strand, within BWI76_RS18175 at 3777.367 kb on + strand, within BWI76_RS18175 at 3777.471 kb on + strand at 3777.489 kb on + strand at 3777.489 kb on + strand at 3777.583 kb on - strand at 3777.748 kb on + strand, within BWI76_RS18180 at 3777.799 kb on + strand, within BWI76_RS18180 at 3777.930 kb on + strand, within BWI76_RS18180 at 3777.977 kb on - strand, within BWI76_RS18180 at 3778.454 kb on + strand, within BWI76_RS18185 at 3778.478 kb on - strand, within BWI76_RS18185 at 3778.484 kb on - strand, within BWI76_RS18185
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_noCarbon with Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x remove 3,776,813 + +0.1 3,776,909 + -0.5 3,776,914 + +0.6 3,776,943 + -0.1 3,777,093 + BWI76_RS18175 0.25 -0.2 3,777,177 + BWI76_RS18175 0.40 +1.6 3,777,284 - BWI76_RS18175 0.59 +0.1 3,777,367 + BWI76_RS18175 0.73 +1.0 3,777,471 + +1.9 3,777,489 + -0.4 3,777,489 + -0.3 3,777,583 - +0.9 3,777,748 + BWI76_RS18180 0.29 +0.4 3,777,799 + BWI76_RS18180 0.35 +0.1 3,777,930 + BWI76_RS18180 0.51 +0.4 3,777,977 - BWI76_RS18180 0.57 -0.1 3,778,454 + BWI76_RS18185 0.17 -0.3 3,778,478 - BWI76_RS18185 0.23 +0.3 3,778,484 - BWI76_RS18185 0.25 +0.4
Or see this region's nucleotide sequence