Experiment: RCH2_defined_noCarbon with Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS17465 and BWI76_RS17470 are separated by 0 nucleotides BWI76_RS17470 and BWI76_RS17475 are separated by 210 nucleotides BWI76_RS17475 and BWI76_RS17480 are separated by 272 nucleotides
BWI76_RS17465: BWI76_RS17465 - C4-dicarboxylic acid transporter DauA, at 3,621,017 to 3,622,696
_RS17465
BWI76_RS17470: BWI76_RS17470 - MerR family transcriptional regulator, at 3,622,697 to 3,623,743
_RS17470
BWI76_RS17475: BWI76_RS17475 - membrane protein, at 3,623,954 to 3,624,229
_RS17475
BWI76_RS17480: BWI76_RS17480 - aminoacyl-tRNA hydrolase, at 3,624,502 to 3,625,086
_RS17480
Position (kb) 3622
3623
3624 Strain fitness (log2 ratio) -2
-1
0
1 at 3621.834 kb on - strand, within BWI76_RS17465 at 3622.577 kb on - strand at 3622.577 kb on - strand at 3622.747 kb on + strand at 3622.773 kb on - strand at 3623.299 kb on + strand, within BWI76_RS17470 at 3623.597 kb on - strand, within BWI76_RS17470 at 3623.822 kb on + strand at 3624.178 kb on + strand, within BWI76_RS17475
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_noCarbon with Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x remove 3,621,834 - BWI76_RS17465 0.49 -0.5 3,622,577 - +0.2 3,622,577 - -1.6 3,622,747 + +0.4 3,622,773 - -1.9 3,623,299 + BWI76_RS17470 0.57 +0.5 3,623,597 - BWI76_RS17470 0.86 +0.5 3,623,822 + -0.3 3,624,178 + BWI76_RS17475 0.81 -2.1
Or see this region's nucleotide sequence