Experiment: RCH2_defined_noCarbon with Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS12475 and BWI76_RS12480 overlap by 4 nucleotides BWI76_RS12480 and BWI76_RS12485 are separated by 244 nucleotides
BWI76_RS12475: BWI76_RS12475 - hypothetical protein, at 2,604,663 to 2,606,060
_RS12475
BWI76_RS12480: BWI76_RS12480 - TIGR01620 family protein, at 2,606,057 to 2,607,118
_RS12480
BWI76_RS12485: BWI76_RS12485 - TyrR family transcriptional regulator, at 2,607,363 to 2,608,904
_RS12485
Position (kb)
2606
2607
2608 Strain fitness (log2 ratio)
-1
0
1 at 2605.111 kb on - strand, within BWI76_RS12475 at 2605.161 kb on - strand, within BWI76_RS12475 at 2605.223 kb on - strand, within BWI76_RS12475 at 2605.375 kb on + strand, within BWI76_RS12475 at 2605.385 kb on + strand, within BWI76_RS12475 at 2605.605 kb on - strand, within BWI76_RS12475 at 2605.670 kb on + strand, within BWI76_RS12475 at 2605.791 kb on - strand, within BWI76_RS12475 at 2605.869 kb on - strand, within BWI76_RS12475 at 2605.934 kb on - strand at 2606.225 kb on - strand, within BWI76_RS12480 at 2606.447 kb on - strand, within BWI76_RS12480 at 2606.567 kb on + strand, within BWI76_RS12480 at 2606.585 kb on - strand, within BWI76_RS12480 at 2606.804 kb on - strand, within BWI76_RS12480 at 2606.925 kb on + strand, within BWI76_RS12480 at 2607.146 kb on + strand at 2607.149 kb on - strand at 2607.351 kb on - strand at 2608.100 kb on - strand, within BWI76_RS12485
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_noCarbon with Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x remove 2,605,111 - BWI76_RS12475 0.32 +0.2 2,605,161 - BWI76_RS12475 0.36 +0.3 2,605,223 - BWI76_RS12475 0.40 +0.3 2,605,375 + BWI76_RS12475 0.51 +0.3 2,605,385 + BWI76_RS12475 0.52 +0.6 2,605,605 - BWI76_RS12475 0.67 +1.1 2,605,670 + BWI76_RS12475 0.72 +0.7 2,605,791 - BWI76_RS12475 0.81 +0.7 2,605,869 - BWI76_RS12475 0.86 -0.1 2,605,934 - +0.1 2,606,225 - BWI76_RS12480 0.16 +0.5 2,606,447 - BWI76_RS12480 0.37 -0.4 2,606,567 + BWI76_RS12480 0.48 +0.6 2,606,585 - BWI76_RS12480 0.50 +0.8 2,606,804 - BWI76_RS12480 0.70 +0.1 2,606,925 + BWI76_RS12480 0.82 +1.0 2,607,146 + -0.6 2,607,149 - +0.1 2,607,351 - -0.4 2,608,100 - BWI76_RS12485 0.48 -1.5
Or see this region's nucleotide sequence