Experiment: RCH2_defined_noCarbon with Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS08620 and BWI76_RS08625 are separated by 9 nucleotides BWI76_RS08625 and BWI76_RS08630 are separated by 205 nucleotides
BWI76_RS08620: BWI76_RS08620 - galactose-1-phosphate uridylyltransferase, at 1,818,272 to 1,819,318
_RS08620
BWI76_RS08625: BWI76_RS08625 - UDP-glucose 4-epimerase GalE, at 1,819,328 to 1,820,339
_RS08625
BWI76_RS08630: BWI76_RS08630 - molybdate ABC transporter ATP-binding protein ModF, at 1,820,545 to 1,822,020
_RS08630
Position (kb)
1819
1820
1821 Strain fitness (log2 ratio)
-2
-1
0
1 at 1818.842 kb on + strand, within BWI76_RS08620 at 1818.920 kb on + strand, within BWI76_RS08620 at 1818.974 kb on - strand, within BWI76_RS08620 at 1818.984 kb on - strand, within BWI76_RS08620 at 1819.150 kb on - strand, within BWI76_RS08620 at 1819.150 kb on - strand, within BWI76_RS08620 at 1819.567 kb on - strand, within BWI76_RS08625 at 1819.866 kb on - strand, within BWI76_RS08625 at 1820.532 kb on + strand at 1820.540 kb on - strand at 1820.598 kb on + strand at 1820.623 kb on - strand at 1820.672 kb on + strand at 1820.706 kb on + strand, within BWI76_RS08630 at 1820.721 kb on + strand, within BWI76_RS08630 at 1820.890 kb on - strand, within BWI76_RS08630 at 1821.077 kb on + strand, within BWI76_RS08630 at 1821.092 kb on - strand, within BWI76_RS08630
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_noCarbon with Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x remove 1,818,842 + BWI76_RS08620 0.54 -0.1 1,818,920 + BWI76_RS08620 0.62 +0.7 1,818,974 - BWI76_RS08620 0.67 -0.6 1,818,984 - BWI76_RS08620 0.68 -2.0 1,819,150 - BWI76_RS08620 0.84 +0.2 1,819,150 - BWI76_RS08620 0.84 +0.7 1,819,567 - BWI76_RS08625 0.24 +0.3 1,819,866 - BWI76_RS08625 0.53 +0.7 1,820,532 + +0.4 1,820,540 - -0.6 1,820,598 + +0.5 1,820,623 - -0.8 1,820,672 + -0.5 1,820,706 + BWI76_RS08630 0.11 -0.3 1,820,721 + BWI76_RS08630 0.12 +0.6 1,820,890 - BWI76_RS08630 0.23 +0.5 1,821,077 + BWI76_RS08630 0.36 -1.6 1,821,092 - BWI76_RS08630 0.37 -0.1
Or see this region's nucleotide sequence