Experiment: Glucose (C) and Betaine (N); with MOPS; with chloride
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS02035 and PFLU_RS02040 are separated by 96 nucleotides PFLU_RS02040 and PFLU_RS02045 overlap by 87 nucleotides
PFLU_RS02035: PFLU_RS02035 - AAA family ATPase, at 456,741 to 458,294
_RS02035
PFLU_RS02040: PFLU_RS02040 - hypothetical protein, at 458,391 to 458,732
_RS02040
PFLU_RS02045: PFLU_RS02045 - glutamate synthase large subunit, at 458,646 to 463,091
_RS02045
Position (kb) 458
459 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 457.398 kb on - strand, within PFLU_RS02035 at 457.398 kb on - strand, within PFLU_RS02035 at 457.398 kb on - strand, within PFLU_RS02035 at 457.520 kb on + strand, within PFLU_RS02035 at 457.520 kb on + strand, within PFLU_RS02035 at 457.521 kb on - strand, within PFLU_RS02035 at 457.521 kb on - strand, within PFLU_RS02035 at 457.521 kb on - strand, within PFLU_RS02035 at 457.521 kb on - strand, within PFLU_RS02035 at 457.531 kb on + strand, within PFLU_RS02035 at 457.531 kb on + strand, within PFLU_RS02035 at 457.531 kb on + strand, within PFLU_RS02035 at 457.531 kb on + strand, within PFLU_RS02035 at 457.531 kb on + strand, within PFLU_RS02035 at 457.531 kb on + strand, within PFLU_RS02035 at 457.531 kb on + strand, within PFLU_RS02035 at 457.531 kb on + strand, within PFLU_RS02035 at 457.531 kb on + strand, within PFLU_RS02035 at 457.531 kb on + strand, within PFLU_RS02035 at 457.532 kb on - strand, within PFLU_RS02035 at 457.532 kb on - strand, within PFLU_RS02035 at 457.532 kb on - strand, within PFLU_RS02035 at 457.532 kb on - strand, within PFLU_RS02035 at 457.532 kb on - strand, within PFLU_RS02035 at 457.532 kb on - strand, within PFLU_RS02035 at 457.532 kb on - strand, within PFLU_RS02035 at 457.532 kb on - strand, within PFLU_RS02035 at 457.532 kb on - strand, within PFLU_RS02035 at 457.532 kb on - strand, within PFLU_RS02035 at 457.532 kb on - strand, within PFLU_RS02035 at 457.539 kb on - strand, within PFLU_RS02035 at 457.754 kb on + strand, within PFLU_RS02035 at 457.755 kb on - strand, within PFLU_RS02035 at 457.755 kb on - strand, within PFLU_RS02035 at 458.034 kb on - strand, within PFLU_RS02035 at 458.115 kb on + strand, within PFLU_RS02035 at 458.121 kb on + strand, within PFLU_RS02035 at 458.121 kb on + strand, within PFLU_RS02035 at 458.121 kb on + strand, within PFLU_RS02035 at 458.121 kb on + strand, within PFLU_RS02035 at 458.121 kb on + strand, within PFLU_RS02035 at 458.122 kb on - strand, within PFLU_RS02035 at 458.122 kb on - strand, within PFLU_RS02035 at 458.122 kb on - strand, within PFLU_RS02035 at 458.154 kb on + strand at 458.154 kb on + strand at 458.154 kb on + strand at 458.154 kb on + strand at 458.154 kb on + strand at 458.154 kb on + strand at 458.154 kb on + strand at 458.154 kb on + strand at 458.154 kb on + strand at 458.155 kb on - strand at 458.155 kb on - strand at 458.155 kb on - strand at 458.155 kb on - strand at 458.155 kb on - strand at 458.155 kb on - strand at 458.155 kb on - strand at 458.155 kb on - strand at 458.155 kb on - strand at 458.155 kb on - strand at 458.166 kb on + strand at 458.167 kb on - strand at 458.167 kb on - strand at 458.424 kb on + strand at 458.439 kb on + strand, within PFLU_RS02040 at 458.529 kb on + strand, within PFLU_RS02040 at 458.529 kb on + strand, within PFLU_RS02040 at 458.529 kb on + strand, within PFLU_RS02040 at 458.529 kb on + strand, within PFLU_RS02040 at 458.529 kb on + strand, within PFLU_RS02040 at 458.529 kb on + strand, within PFLU_RS02040 at 458.529 kb on + strand, within PFLU_RS02040 at 458.529 kb on + strand, within PFLU_RS02040 at 458.529 kb on + strand, within PFLU_RS02040 at 458.529 kb on + strand, within PFLU_RS02040 at 458.530 kb on - strand, within PFLU_RS02040 at 458.530 kb on - strand, within PFLU_RS02040 at 458.530 kb on - strand, within PFLU_RS02040 at 458.530 kb on - strand, within PFLU_RS02040 at 458.530 kb on - strand, within PFLU_RS02040 at 458.530 kb on - strand, within PFLU_RS02040 at 458.530 kb on - strand, within PFLU_RS02040 at 458.530 kb on - strand, within PFLU_RS02040 at 458.530 kb on - strand, within PFLU_RS02040 at 458.530 kb on - strand, within PFLU_RS02040 at 458.530 kb on - strand, within PFLU_RS02040 at 458.565 kb on + strand, within PFLU_RS02040 at 458.619 kb on - strand, within PFLU_RS02040 at 458.661 kb on + strand at 458.661 kb on + strand at 458.661 kb on + strand at 458.662 kb on - strand at 458.662 kb on - strand at 458.662 kb on - strand at 458.662 kb on - strand at 458.662 kb on - strand at 458.684 kb on + strand at 458.684 kb on + strand at 458.684 kb on + strand at 458.685 kb on - strand at 458.685 kb on - strand at 458.685 kb on - strand at 458.685 kb on - strand at 458.685 kb on - strand at 458.704 kb on + strand at 458.704 kb on + strand at 458.712 kb on - strand at 458.712 kb on - strand at 458.732 kb on + strand at 458.732 kb on + strand at 458.732 kb on + strand at 458.733 kb on - strand at 458.898 kb on + strand at 458.898 kb on + strand at 458.898 kb on + strand at 458.899 kb on - strand at 459.177 kb on + strand, within PFLU_RS02045 at 459.177 kb on + strand, within PFLU_RS02045 at 459.177 kb on + strand, within PFLU_RS02045 at 459.177 kb on + strand, within PFLU_RS02045 at 459.177 kb on + strand, within PFLU_RS02045 at 459.177 kb on + strand, within PFLU_RS02045 at 459.177 kb on + strand, within PFLU_RS02045 at 459.177 kb on + strand, within PFLU_RS02045 at 459.177 kb on + strand, within PFLU_RS02045 at 459.177 kb on + strand, within PFLU_RS02045 at 459.177 kb on + strand, within PFLU_RS02045 at 459.177 kb on + strand, within PFLU_RS02045 at 459.177 kb on + strand, within PFLU_RS02045 at 459.177 kb on + strand, within PFLU_RS02045 at 459.177 kb on + strand, within PFLU_RS02045 at 459.177 kb on + strand, within PFLU_RS02045 at 459.177 kb on + strand, within PFLU_RS02045 at 459.177 kb on + strand, within PFLU_RS02045 at 459.177 kb on + strand, within PFLU_RS02045 at 459.177 kb on + strand, within PFLU_RS02045 at 459.177 kb on + strand, within PFLU_RS02045 at 459.178 kb on - strand, within PFLU_RS02045 at 459.178 kb on - strand, within PFLU_RS02045 at 459.178 kb on - strand, within PFLU_RS02045 at 459.178 kb on - strand, within PFLU_RS02045 at 459.178 kb on - strand, within PFLU_RS02045 at 459.178 kb on - strand, within PFLU_RS02045 at 459.178 kb on - strand, within PFLU_RS02045 at 459.178 kb on - strand, within PFLU_RS02045 at 459.178 kb on - strand, within PFLU_RS02045 at 459.178 kb on - strand, within PFLU_RS02045 at 459.178 kb on - strand, within PFLU_RS02045 at 459.178 kb on - strand, within PFLU_RS02045 at 459.178 kb on - strand, within PFLU_RS02045 at 459.178 kb on - strand, within PFLU_RS02045 at 459.178 kb on - strand, within PFLU_RS02045 at 459.178 kb on - strand, within PFLU_RS02045 at 459.178 kb on - strand, within PFLU_RS02045 at 459.178 kb on - strand, within PFLU_RS02045 at 459.178 kb on - strand, within PFLU_RS02045 at 459.178 kb on - strand, within PFLU_RS02045 at 459.210 kb on + strand, within PFLU_RS02045 at 459.210 kb on + strand, within PFLU_RS02045 at 459.211 kb on - strand, within PFLU_RS02045 at 459.211 kb on - strand, within PFLU_RS02045 at 459.211 kb on - strand, within PFLU_RS02045 at 459.211 kb on - strand, within PFLU_RS02045 at 459.211 kb on - strand, within PFLU_RS02045 at 459.211 kb on - strand, within PFLU_RS02045 at 459.211 kb on - strand, within PFLU_RS02045 at 459.211 kb on - strand, within PFLU_RS02045 at 459.211 kb on - strand, within PFLU_RS02045 at 459.211 kb on - strand, within PFLU_RS02045 at 459.211 kb on - strand, within PFLU_RS02045 at 459.211 kb on - strand, within PFLU_RS02045 at 459.211 kb on - strand, within PFLU_RS02045 at 459.211 kb on - strand, within PFLU_RS02045 at 459.212 kb on + strand, within PFLU_RS02045 at 459.212 kb on + strand, within PFLU_RS02045 at 459.212 kb on + strand, within PFLU_RS02045 at 459.213 kb on - strand, within PFLU_RS02045 at 459.213 kb on - strand, within PFLU_RS02045 at 459.213 kb on - strand, within PFLU_RS02045 at 459.213 kb on - strand, within PFLU_RS02045 at 459.249 kb on + strand, within PFLU_RS02045 at 459.249 kb on + strand, within PFLU_RS02045 at 459.250 kb on - strand, within PFLU_RS02045 at 459.250 kb on - strand, within PFLU_RS02045 at 459.250 kb on - strand, within PFLU_RS02045 at 459.250 kb on - strand, within PFLU_RS02045 at 459.618 kb on + strand, within PFLU_RS02045 at 459.618 kb on + strand, within PFLU_RS02045 at 459.619 kb on - strand, within PFLU_RS02045 at 459.619 kb on - strand, within PFLU_RS02045 at 459.619 kb on - strand, within PFLU_RS02045 at 459.619 kb on - strand, within PFLU_RS02045 at 459.619 kb on - strand, within PFLU_RS02045 at 459.624 kb on + strand, within PFLU_RS02045 at 459.624 kb on + strand, within PFLU_RS02045 at 459.624 kb on + strand, within PFLU_RS02045 at 459.624 kb on + strand, within PFLU_RS02045 at 459.625 kb on - strand, within PFLU_RS02045 at 459.625 kb on - strand, within PFLU_RS02045 at 459.625 kb on - strand, within PFLU_RS02045 at 459.625 kb on - strand, within PFLU_RS02045
Per-strain Table
Position Strand Gene LocusTag Fraction Glucose (C) and Betaine (N); with MOPS; with chloride remove 457,398 - PFLU_RS02035 0.42 -0.5 457,398 - PFLU_RS02035 0.42 +0.6 457,398 - PFLU_RS02035 0.42 -0.4 457,520 + PFLU_RS02035 0.50 -1.7 457,520 + PFLU_RS02035 0.50 +1.4 457,521 - PFLU_RS02035 0.50 -1.0 457,521 - PFLU_RS02035 0.50 +1.4 457,521 - PFLU_RS02035 0.50 +2.2 457,521 - PFLU_RS02035 0.50 +1.7 457,531 + PFLU_RS02035 0.51 -0.8 457,531 + PFLU_RS02035 0.51 +0.4 457,531 + PFLU_RS02035 0.51 +1.1 457,531 + PFLU_RS02035 0.51 +0.1 457,531 + PFLU_RS02035 0.51 +0.8 457,531 + PFLU_RS02035 0.51 +0.3 457,531 + PFLU_RS02035 0.51 +0.7 457,531 + PFLU_RS02035 0.51 +0.5 457,531 + PFLU_RS02035 0.51 +0.9 457,531 + PFLU_RS02035 0.51 -0.8 457,532 - PFLU_RS02035 0.51 -2.3 457,532 - PFLU_RS02035 0.51 -0.4 457,532 - PFLU_RS02035 0.51 +0.4 457,532 - PFLU_RS02035 0.51 -0.0 457,532 - PFLU_RS02035 0.51 +0.7 457,532 - PFLU_RS02035 0.51 +1.1 457,532 - PFLU_RS02035 0.51 +0.9 457,532 - PFLU_RS02035 0.51 -1.3 457,532 - PFLU_RS02035 0.51 +1.1 457,532 - PFLU_RS02035 0.51 -0.0 457,532 - PFLU_RS02035 0.51 -1.5 457,539 - PFLU_RS02035 0.51 +1.8 457,754 + PFLU_RS02035 0.65 -0.2 457,755 - PFLU_RS02035 0.65 -0.7 457,755 - PFLU_RS02035 0.65 +1.7 458,034 - PFLU_RS02035 0.83 +0.6 458,115 + PFLU_RS02035 0.88 -3.1 458,121 + PFLU_RS02035 0.89 +0.6 458,121 + PFLU_RS02035 0.89 +1.2 458,121 + PFLU_RS02035 0.89 -0.1 458,121 + PFLU_RS02035 0.89 -0.1 458,121 + PFLU_RS02035 0.89 +0.7 458,122 - PFLU_RS02035 0.89 +0.6 458,122 - PFLU_RS02035 0.89 -0.8 458,122 - PFLU_RS02035 0.89 +0.2 458,154 + -0.6 458,154 + -1.0 458,154 + -0.0 458,154 + -0.3 458,154 + -2.2 458,154 + -0.0 458,154 + -2.0 458,154 + -0.4 458,154 + +0.4 458,155 - -0.2 458,155 - -0.7 458,155 - -1.3 458,155 - +1.8 458,155 - +1.7 458,155 - -0.2 458,155 - -0.7 458,155 - -0.0 458,155 - -0.7 458,155 - +0.8 458,166 + +0.4 458,167 - -0.2 458,167 - +1.1 458,424 + -1.3 458,439 + PFLU_RS02040 0.14 +0.6 458,529 + PFLU_RS02040 0.40 -2.3 458,529 + PFLU_RS02040 0.40 +1.8 458,529 + PFLU_RS02040 0.40 -1.0 458,529 + PFLU_RS02040 0.40 +0.1 458,529 + PFLU_RS02040 0.40 +0.5 458,529 + PFLU_RS02040 0.40 +1.5 458,529 + PFLU_RS02040 0.40 -0.7 458,529 + PFLU_RS02040 0.40 -1.0 458,529 + PFLU_RS02040 0.40 +0.1 458,529 + PFLU_RS02040 0.40 -0.2 458,530 - PFLU_RS02040 0.41 -2.2 458,530 - PFLU_RS02040 0.41 -1.2 458,530 - PFLU_RS02040 0.41 -1.4 458,530 - PFLU_RS02040 0.41 -0.2 458,530 - PFLU_RS02040 0.41 -1.6 458,530 - PFLU_RS02040 0.41 +0.4 458,530 - PFLU_RS02040 0.41 -0.5 458,530 - PFLU_RS02040 0.41 -1.6 458,530 - PFLU_RS02040 0.41 -1.8 458,530 - PFLU_RS02040 0.41 -1.4 458,530 - PFLU_RS02040 0.41 -2.3 458,565 + PFLU_RS02040 0.51 -0.7 458,619 - PFLU_RS02040 0.67 -1.7 458,661 + -0.0 458,661 + -3.4 458,661 + -1.3 458,662 - -2.0 458,662 - -1.4 458,662 - -1.2 458,662 - -3.7 458,662 - -3.1 458,684 + -3.4 458,684 + -2.2 458,684 + +0.7 458,685 - -1.8 458,685 - -2.3 458,685 - -2.4 458,685 - -3.3 458,685 - -2.7 458,704 + -1.4 458,704 + -3.2 458,712 - -2.9 458,712 - -1.9 458,732 + -1.2 458,732 + -1.0 458,732 + -2.8 458,733 - -2.0 458,898 + -2.8 458,898 + -1.6 458,898 + -2.6 458,899 - -2.0 459,177 + PFLU_RS02045 0.12 -2.5 459,177 + PFLU_RS02045 0.12 -1.8 459,177 + PFLU_RS02045 0.12 -0.7 459,177 + PFLU_RS02045 0.12 -2.2 459,177 + PFLU_RS02045 0.12 -1.2 459,177 + PFLU_RS02045 0.12 -1.0 459,177 + PFLU_RS02045 0.12 -1.8 459,177 + PFLU_RS02045 0.12 -1.4 459,177 + PFLU_RS02045 0.12 -1.8 459,177 + PFLU_RS02045 0.12 -0.0 459,177 + PFLU_RS02045 0.12 -1.0 459,177 + PFLU_RS02045 0.12 -1.9 459,177 + PFLU_RS02045 0.12 -2.0 459,177 + PFLU_RS02045 0.12 -1.3 459,177 + PFLU_RS02045 0.12 -2.5 459,177 + PFLU_RS02045 0.12 -1.2 459,177 + PFLU_RS02045 0.12 -0.3 459,177 + PFLU_RS02045 0.12 -4.2 459,177 + PFLU_RS02045 0.12 -1.5 459,177 + PFLU_RS02045 0.12 -1.6 459,177 + PFLU_RS02045 0.12 -1.6 459,178 - PFLU_RS02045 0.12 -0.9 459,178 - PFLU_RS02045 0.12 -2.5 459,178 - PFLU_RS02045 0.12 -2.1 459,178 - PFLU_RS02045 0.12 -1.2 459,178 - PFLU_RS02045 0.12 +1.3 459,178 - PFLU_RS02045 0.12 -0.3 459,178 - PFLU_RS02045 0.12 -0.7 459,178 - PFLU_RS02045 0.12 -2.2 459,178 - PFLU_RS02045 0.12 -2.0 459,178 - PFLU_RS02045 0.12 -2.8 459,178 - PFLU_RS02045 0.12 -3.4 459,178 - PFLU_RS02045 0.12 -2.6 459,178 - PFLU_RS02045 0.12 -2.4 459,178 - PFLU_RS02045 0.12 -3.1 459,178 - PFLU_RS02045 0.12 -2.0 459,178 - PFLU_RS02045 0.12 -1.4 459,178 - PFLU_RS02045 0.12 -2.5 459,178 - PFLU_RS02045 0.12 -0.0 459,178 - PFLU_RS02045 0.12 -1.3 459,178 - PFLU_RS02045 0.12 -0.0 459,210 + PFLU_RS02045 0.13 -0.9 459,210 + PFLU_RS02045 0.13 -3.1 459,211 - PFLU_RS02045 0.13 -3.0 459,211 - PFLU_RS02045 0.13 -2.8 459,211 - PFLU_RS02045 0.13 -3.2 459,211 - PFLU_RS02045 0.13 -0.5 459,211 - PFLU_RS02045 0.13 -2.0 459,211 - PFLU_RS02045 0.13 -1.4 459,211 - PFLU_RS02045 0.13 -2.0 459,211 - PFLU_RS02045 0.13 -1.9 459,211 - PFLU_RS02045 0.13 -1.2 459,211 - PFLU_RS02045 0.13 -2.7 459,211 - PFLU_RS02045 0.13 -2.8 459,211 - PFLU_RS02045 0.13 -0.7 459,211 - PFLU_RS02045 0.13 -2.7 459,211 - PFLU_RS02045 0.13 -1.0 459,212 + PFLU_RS02045 0.13 -2.3 459,212 + PFLU_RS02045 0.13 -1.9 459,212 + PFLU_RS02045 0.13 -2.4 459,213 - PFLU_RS02045 0.13 -3.2 459,213 - PFLU_RS02045 0.13 -2.1 459,213 - PFLU_RS02045 0.13 -3.1 459,213 - PFLU_RS02045 0.13 -1.7 459,249 + PFLU_RS02045 0.14 -2.9 459,249 + PFLU_RS02045 0.14 -2.2 459,250 - PFLU_RS02045 0.14 -1.5 459,250 - PFLU_RS02045 0.14 -1.1 459,250 - PFLU_RS02045 0.14 -1.3 459,250 - PFLU_RS02045 0.14 -2.2 459,618 + PFLU_RS02045 0.22 -1.7 459,618 + PFLU_RS02045 0.22 -2.6 459,619 - PFLU_RS02045 0.22 -0.7 459,619 - PFLU_RS02045 0.22 -2.0 459,619 - PFLU_RS02045 0.22 -2.7 459,619 - PFLU_RS02045 0.22 -2.0 459,619 - PFLU_RS02045 0.22 -2.4 459,624 + PFLU_RS02045 0.22 -2.0 459,624 + PFLU_RS02045 0.22 -0.9 459,624 + PFLU_RS02045 0.22 -2.8 459,624 + PFLU_RS02045 0.22 +1.3 459,625 - PFLU_RS02045 0.22 -2.5 459,625 - PFLU_RS02045 0.22 -1.9 459,625 - PFLU_RS02045 0.22 -0.5 459,625 - PFLU_RS02045 0.22 -2.0
Or see this region's nucleotide sequence