Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS14590

Experiment: RCH2_defined_noCarbon with Mixed culture; Escherichia coli BW25113 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_noCarbon with Mixed culture; Escherichia coli BW25113 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x
3,061,004	-		BWI76_RS14580	0.89	-2.1
3,061,110	+				-0.7
3,061,110	+				-0.7
3,061,110	+				-2.5
3,061,118	-				-0.7
3,061,118	-				+0.1
3,061,118	-				+1.8
3,061,118	-				+0.8
3,061,118	-				-2.2
3,061,213	-		BWI76_RS14585	0.11	-0.2
3,061,306	-		BWI76_RS14585	0.21	+0.0
3,061,316	-		BWI76_RS14585	0.22	+0.5
3,061,316	-		BWI76_RS14585	0.22	-0.6
3,061,410	-		BWI76_RS14585	0.33	+1.0
3,061,410	-		BWI76_RS14585	0.33	+0.8
3,061,464	-		BWI76_RS14585	0.39	-0.1
3,061,478	-		BWI76_RS14585	0.41	+0.2
3,061,478	-		BWI76_RS14585	0.41	+0.5
3,061,535	-		BWI76_RS14585	0.48	+0.7
3,061,566	-		BWI76_RS14585	0.51	+1.2
3,061,568	-		BWI76_RS14585	0.51	-1.1
3,061,568	-		BWI76_RS14585	0.51	-0.3
3,061,568	-		BWI76_RS14585	0.51	+0.1
3,061,568	-		BWI76_RS14585	0.51	-0.2
3,061,568	-		BWI76_RS14585	0.51	+0.3
3,061,583	+		BWI76_RS14585	0.53	-0.2
3,061,591	-		BWI76_RS14585	0.54	+0.5
3,061,591	-		BWI76_RS14585	0.54	+0.8
3,061,591	-		BWI76_RS14585	0.54	+0.0
3,061,594	+		BWI76_RS14585	0.54	+0.8
3,061,594	+		BWI76_RS14585	0.54	-0.7
3,061,594	+		BWI76_RS14585	0.54	-1.3
3,061,594	+		BWI76_RS14585	0.54	+0.4
3,061,596	+		BWI76_RS14585	0.55	-0.4
3,061,596	+		BWI76_RS14585	0.55	+2.4
3,061,596	+		BWI76_RS14585	0.55	+0.8
3,061,596	+		BWI76_RS14585	0.55	-1.0
3,061,596	+		BWI76_RS14585	0.55	+1.8
3,061,602	-		BWI76_RS14585	0.55	-0.2
3,061,604	-		BWI76_RS14585	0.55	+1.7
3,061,604	-		BWI76_RS14585	0.55	+0.2
3,061,604	-		BWI76_RS14585	0.55	+0.2
3,061,604	-		BWI76_RS14585	0.55	-1.1
3,061,604	-		BWI76_RS14585	0.55	+0.7
3,061,691	-		BWI76_RS14585	0.65	+1.7
3,061,712	+		BWI76_RS14585	0.68	-1.0
3,061,799	-		BWI76_RS14585	0.78	-0.9
3,061,849	-		BWI76_RS14585	0.84	-2.0
3,061,957	-				+0.4
3,062,337	+		BWI76_RS14590	0.36	-0.2
3,062,345	-		BWI76_RS14590	0.37	-1.4
3,062,345	-		BWI76_RS14590	0.37	+0.9
3,062,345	-		BWI76_RS14590	0.37	-0.2
3,062,350	-		BWI76_RS14590	0.37	+0.7
3,062,367	+		BWI76_RS14590	0.39	-0.8
3,062,368	+		BWI76_RS14590	0.39	-1.3
3,062,368	-		BWI76_RS14590	0.39	-0.5
3,062,393	+		BWI76_RS14590	0.42	+0.1
3,062,401	-		BWI76_RS14590	0.43	-0.0
3,062,429	+		BWI76_RS14590	0.46	-1.2
3,062,429	+		BWI76_RS14590	0.46	+0.3
3,062,437	-		BWI76_RS14590	0.46	-0.3
3,062,447	-		BWI76_RS14590	0.47	-0.2
3,062,447	-		BWI76_RS14590	0.47	-1.0
3,062,460	+		BWI76_RS14590	0.49	-0.3
3,062,460	+		BWI76_RS14590	0.49	+0.4
3,062,460	+		BWI76_RS14590	0.49	+0.1
3,062,462	+		BWI76_RS14590	0.49	+1.0
3,062,462	+		BWI76_RS14590	0.49	-0.0
3,062,468	-		BWI76_RS14590	0.50	-0.3
3,062,488	-		BWI76_RS14590	0.52	+0.6
3,062,510	+		BWI76_RS14590	0.54	-0.2
3,062,518	-		BWI76_RS14590	0.55	+0.1
3,062,542	+		BWI76_RS14590	0.57	-0.4
3,062,547	+		BWI76_RS14590	0.58	+0.1
3,062,552	+		BWI76_RS14590	0.58	-0.7
3,062,552	+		BWI76_RS14590	0.58	-0.6
3,062,552	+		BWI76_RS14590	0.58	-0.4
3,062,552	+		BWI76_RS14590	0.58	-1.0
3,062,552	+		BWI76_RS14590	0.58	-0.7
3,062,552	+		BWI76_RS14590	0.58	+0.8
3,062,552	+		BWI76_RS14590	0.58	-0.5
3,062,552	+		BWI76_RS14590	0.58	-1.0
3,062,552	+		BWI76_RS14590	0.58	+1.1
3,062,560	-		BWI76_RS14590	0.59	-1.2
3,062,560	-		BWI76_RS14590	0.59	-0.3
3,062,563	+		BWI76_RS14590	0.60	-1.7
3,062,563	+		BWI76_RS14590	0.60	-0.9
3,062,563	+		BWI76_RS14590	0.60	+0.8
3,062,571	-		BWI76_RS14590	0.60	-0.2
3,062,571	-		BWI76_RS14590	0.60	-0.2
3,062,576	+		BWI76_RS14590	0.61	-2.0
3,062,676	+				-0.2
3,062,747	-		BWI76_RS14590	0.79	-1.4
3,062,811	-		BWI76_RS14590	0.86	-0.9
3,062,837	-		BWI76_RS14590	0.88	-0.9
3,062,839	+		BWI76_RS14590	0.89	-1.1
3,062,847	-		BWI76_RS14590	0.89	+0.7
3,062,847	-		BWI76_RS14590	0.89	+0.8
3,062,906	-				-0.3
3,062,921	-				+0.8
3,062,968	+				+0.7
3,062,969	+				-0.6
3,062,979	+				-0.4
3,062,979	+				+0.8
3,062,979	+				+0.0
3,062,985	-				+0.7
3,062,987	-				+0.2
3,062,987	-				-0.4
3,062,990	-				-0.2
3,062,992	-				-0.4
3,063,044	+				+0.5
3,063,044	+				-1.4
3,063,069	+				-0.5
3,063,069	+				-1.1
3,063,077	-				-0.1
3,063,127	-				-0.8
3,063,130	-				+0.4
3,063,130	-				+1.8
3,063,136	-				+2.1
3,063,158	-				-1.1
3,063,163	+				-0.1
3,063,242	+				-1.1
3,063,264	+				+0.9
3,063,354	+				+0.0
3,063,387	-				+2.9
3,063,503	+		BWI76_RS14595	0.21	+1.0
3,063,511	-		BWI76_RS14595	0.21	-1.1
3,063,511	-		BWI76_RS14595	0.21	-0.1
3,063,511	-		BWI76_RS14595	0.21	-0.6
3,063,536	-				+0.4
3,063,589	-		BWI76_RS14595	0.29	-0.1
3,063,652	-				-2.0
3,063,761	-		BWI76_RS14595	0.46	+0.4
3,063,764	+		BWI76_RS14595	0.46	+0.9
3,063,818	+		BWI76_RS14595	0.51	-1.7
3,063,884	-		BWI76_RS14595	0.58	-0.5