Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS14440

Experiment: RCH2_defined_noCarbon with Mixed culture; Escherichia coli BW25113 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_noCarbon with Mixed culture; Escherichia coli BW25113 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x
3,013,010	-				+1.4
3,013,134	-				+0.4
3,013,181	-		BWI76_RS14435	0.15	+1.0
3,013,705	-		BWI76_RS14435	0.88	+0.8
3,013,746	-				-0.2
3,013,847	+				-1.5
3,013,849	-				-0.6
3,013,879	+		BWI76_RS14440	0.13	-0.2
3,013,879	+		BWI76_RS14440	0.13	-0.8
3,013,882	-		BWI76_RS14440	0.13	+0.2
3,013,882	-		BWI76_RS14440	0.13	+0.6
3,013,887	-		BWI76_RS14440	0.14	-0.1
3,013,887	-		BWI76_RS14440	0.14	-0.3
3,013,887	-		BWI76_RS14440	0.14	-0.0
3,013,887	-		BWI76_RS14440	0.14	-2.7
3,013,894	-		BWI76_RS14440	0.15	+0.5
3,013,962	-		BWI76_RS14440	0.26	-2.3
3,013,967	-		BWI76_RS14440	0.26	-0.9
3,013,981	-		BWI76_RS14440	0.28	-0.4
3,014,019	+		BWI76_RS14440	0.34	+0.2
3,014,019	+		BWI76_RS14440	0.34	-2.2
3,014,019	+		BWI76_RS14440	0.34	-0.2
3,014,041	-		BWI76_RS14440	0.38	+0.2
3,014,046	+		BWI76_RS14440	0.38	-1.2
3,014,054	-		BWI76_RS14440	0.40	-0.5
3,014,054	-		BWI76_RS14440	0.40	-0.1
3,014,054	-		BWI76_RS14440	0.40	-1.2
3,014,054	-		BWI76_RS14440	0.40	+0.1
3,014,054	-		BWI76_RS14440	0.40	-0.1
3,014,059	-		BWI76_RS14440	0.40	-0.1
3,014,059	-		BWI76_RS14440	0.40	-0.5
3,014,059	-		BWI76_RS14440	0.40	+1.0
3,014,059	-		BWI76_RS14440	0.40	-0.6
3,014,059	-		BWI76_RS14440	0.40	-0.2
3,014,059	-		BWI76_RS14440	0.40	-0.2
3,014,059	-		BWI76_RS14440	0.40	-1.7
3,014,071	-		BWI76_RS14440	0.42	+0.5
3,014,071	-		BWI76_RS14440	0.42	-0.7
3,014,071	-		BWI76_RS14440	0.42	-1.2
3,014,071	-		BWI76_RS14440	0.42	-0.5
3,014,179	+		BWI76_RS14440	0.59	-1.5
3,014,187	-		BWI76_RS14440	0.60	+0.8
3,014,191	-		BWI76_RS14440	0.60	-1.2
3,014,201	-				-2.2
3,014,201	-		BWI76_RS14440	0.62	+0.8
3,014,201	-		BWI76_RS14440	0.62	-0.7
3,014,201	-		BWI76_RS14440	0.62	+0.7
3,014,201	-		BWI76_RS14440	0.62	-0.2
3,014,211	-		BWI76_RS14440	0.63	-0.7
3,014,211	-		BWI76_RS14440	0.63	+0.6
3,014,323	-		BWI76_RS14440	0.81	-1.7
3,014,377	-		BWI76_RS14440	0.89	-1.2
3,014,457	+				-0.5
3,014,459	+				+1.2
3,014,465	-				-0.7
3,014,465	-				+1.4
3,014,467	-				+0.8
3,014,467	-				+1.4
3,014,467	-				-0.9
3,014,471	+				-1.7
3,014,479	-				-0.7
3,014,481	+				-2.0
3,014,484	-				+0.3
3,014,484	-				-1.0
3,014,508	-				+0.3
3,014,508	-				+0.9
3,014,556	-				+1.3
3,014,556	-				-0.9
3,014,556	-				+0.9
3,014,556	-				-0.1
3,014,556	-				-0.3
3,014,556	-				-0.7
3,014,559	+				+1.3
3,014,559	+				-0.0
3,014,577	-				+2.9
3,014,577	-				-0.7
3,014,579	+		BWI76_RS14445	0.10	-1.1
3,014,587	-				-2.1
3,014,600	-		BWI76_RS14445	0.13	-0.1
3,014,600	-		BWI76_RS14445	0.13	-1.5
3,014,614	-				-0.3
3,014,637	+		BWI76_RS14445	0.18	+0.9
3,014,637	+		BWI76_RS14445	0.18	+2.4
3,014,637	+		BWI76_RS14445	0.18	-0.6
3,014,645	-		BWI76_RS14445	0.19	-3.1
3,014,649	+		BWI76_RS14445	0.19	-2.1
3,014,657	-		BWI76_RS14445	0.20	-1.0
3,014,663	+		BWI76_RS14445	0.21	+0.9
3,014,698	+		BWI76_RS14445	0.26	-0.7
3,014,706	+		BWI76_RS14445	0.27	-0.7
3,014,706	+		BWI76_RS14445	0.27	+0.9
3,014,706	+		BWI76_RS14445	0.27	-1.1
3,014,706	+		BWI76_RS14445	0.27	+1.3
3,014,714	-		BWI76_RS14445	0.28	+0.9
3,014,714	-		BWI76_RS14445	0.28	-2.1
3,014,716	+		BWI76_RS14445	0.28	-0.6
3,014,716	+		BWI76_RS14445	0.28	-0.6
3,014,719	+		BWI76_RS14445	0.29	-1.1
3,014,727	-		BWI76_RS14445	0.30	-1.1
3,014,729	+				+0.9
3,014,729	+		BWI76_RS14445	0.30	+0.2
3,014,729	+		BWI76_RS14445	0.30	+0.0
3,014,730	+		BWI76_RS14445	0.30	+2.4
3,014,730	+		BWI76_RS14445	0.30	-0.8
3,014,730	+		BWI76_RS14445	0.30	-0.7
3,014,730	+		BWI76_RS14445	0.30	-1.5
3,014,737	-		BWI76_RS14445	0.31	-0.1
3,014,737	-		BWI76_RS14445	0.31	-1.5
3,014,738	-		BWI76_RS14445	0.31	-1.7
3,014,759	-		BWI76_RS14445	0.34	-0.0
3,014,759	-		BWI76_RS14445	0.34	-1.7
3,014,759	-		BWI76_RS14445	0.34	+0.3
3,014,759	-		BWI76_RS14445	0.34	+0.0
3,014,759	-		BWI76_RS14445	0.34	+0.9
3,014,759	-		BWI76_RS14445	0.34	-1.5
3,014,828	+		BWI76_RS14445	0.43	+1.1
3,014,828	+		BWI76_RS14445	0.43	+0.1
3,014,828	+		BWI76_RS14445	0.43	-0.1
3,014,828	+		BWI76_RS14445	0.43	+0.6
3,014,831	+		BWI76_RS14445	0.44	-0.5
3,014,831	+		BWI76_RS14445	0.44	-1.1
3,014,833	+		BWI76_RS14445	0.44	+0.3
3,014,833	+		BWI76_RS14445	0.44	-0.5
3,014,836	-				-0.1
3,014,836	-		BWI76_RS14445	0.44	-0.1
3,014,838	+		BWI76_RS14445	0.44	-0.4
3,014,905	-		BWI76_RS14445	0.53	-0.1
3,014,914	-		BWI76_RS14445	0.55	-0.5
3,014,924	-		BWI76_RS14445	0.56	+0.6
3,014,955	+		BWI76_RS14445	0.60	-0.9
3,014,968	+		BWI76_RS14445	0.62	+0.9
3,014,975	-		BWI76_RS14445	0.63	-0.1
3,015,148	+		BWI76_RS14445	0.86	-0.1
3,015,149	-		BWI76_RS14445	0.86	+0.3
3,015,149	-		BWI76_RS14445	0.86	-0.7
3,015,216	-				-0.5
3,015,283	+				+2.4
3,015,291	-				+0.3
3,015,407	-				+0.3
3,015,407	-				+0.5
3,015,420	+				-1.1
3,015,420	-				-1.8
3,015,426	-				-0.3
3,015,426	-				+1.6
3,015,426	-				-2.7