Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS14340

Experiment: RCH2_defined_noCarbon with Mixed culture; Escherichia coli BW25113 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_noCarbon with Mixed culture; Escherichia coli BW25113 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x
2,994,957	-				+0.1
2,995,011	+		BWI76_RS14335	0.34	+0.2
2,995,017	+		BWI76_RS14335	0.34	+0.6
2,995,020	-		BWI76_RS14335	0.34	-1.0
2,995,104	-		BWI76_RS14335	0.41	-0.6
2,995,115	+		BWI76_RS14335	0.42	+0.4
2,995,139	+		BWI76_RS14335	0.44	-0.8
2,995,149	+		BWI76_RS14335	0.45	-2.2
2,995,152	-		BWI76_RS14335	0.45	-1.5
2,995,157	-		BWI76_RS14335	0.46	-0.3
2,995,165	-		BWI76_RS14335	0.46	-0.7
2,995,179	+		BWI76_RS14335	0.48	+0.4
2,995,207	+		BWI76_RS14335	0.50	+1.2
2,995,218	+		BWI76_RS14335	0.51	+0.6
2,995,226	-		BWI76_RS14335	0.51	-1.2
2,995,235	+		BWI76_RS14335	0.52	-0.6
2,995,272	+		BWI76_RS14335	0.55	-0.2
2,995,272	+		BWI76_RS14335	0.55	+0.5
2,995,376	+		BWI76_RS14335	0.64	+0.8
2,995,459	+		BWI76_RS14335	0.71	-1.1
2,995,459	+		BWI76_RS14335	0.71	+0.6
2,995,459	+		BWI76_RS14335	0.71	-0.2
2,995,459	+		BWI76_RS14335	0.71	-0.2
2,995,459	+		BWI76_RS14335	0.71	-0.5
2,995,461	+		BWI76_RS14335	0.71	-0.1
2,995,465	+		BWI76_RS14335	0.71	-1.0
2,995,472	+		BWI76_RS14335	0.72	-0.9
2,995,492	+		BWI76_RS14335	0.73	-1.2
2,995,554	+		BWI76_RS14335	0.79	+0.1
2,995,557	-		BWI76_RS14335	0.79	-1.8
2,995,596	+		BWI76_RS14335	0.82	-0.2
2,995,596	+		BWI76_RS14335	0.82	+0.2
2,995,596	-		BWI76_RS14335	0.82	+1.0
2,995,596	-		BWI76_RS14335	0.82	-1.7
2,995,604	-				-0.8
2,995,631	+		BWI76_RS14335	0.85	+1.5
2,995,633	+		BWI76_RS14335	0.85	+0.7
2,995,638	+		BWI76_RS14335	0.85	+0.1
2,995,638	+		BWI76_RS14335	0.85	+0.8
2,995,648	+		BWI76_RS14335	0.86	-0.1
2,995,648	+		BWI76_RS14335	0.86	+0.3
2,995,648	+		BWI76_RS14335	0.86	+0.3
2,995,648	+		BWI76_RS14335	0.86	-1.0
2,995,648	+		BWI76_RS14335	0.86	+0.4
2,995,648	+		BWI76_RS14335	0.86	-0.1
2,995,648	+		BWI76_RS14335	0.86	-0.2
2,995,648	+		BWI76_RS14335	0.86	+0.0
2,995,648	+		BWI76_RS14335	0.86	-0.0
2,995,656	-		BWI76_RS14335	0.87	-0.9
2,995,656	-		BWI76_RS14335	0.87	+0.8
2,995,712	+				+0.8
2,995,720	-				-1.3
2,995,722	-				-0.6
2,995,753	+				-0.6
2,995,753	+				-0.9
2,995,753	+				-1.8
2,995,814	+				-0.8
2,995,880	-				+0.0
2,995,987	+				-1.2
2,996,029	-				+1.2
2,996,053	+				+0.4
2,996,061	-				+0.8
2,996,127	-		BWI76_RS14340	0.16	+0.2
2,996,130	-		BWI76_RS14340	0.16	-0.4
2,996,159	-		BWI76_RS14340	0.18	+0.2
2,996,240	+				-0.8
2,996,240	-				+0.8
2,996,252	+		BWI76_RS14340	0.27	-0.3
2,996,286	-		BWI76_RS14340	0.29	+0.8
2,996,341	-				+0.8
2,996,397	+		BWI76_RS14340	0.39	-2.1
2,996,397	+		BWI76_RS14340	0.39	-1.1
2,996,438	-		BWI76_RS14340	0.43	-0.2
2,996,438	-		BWI76_RS14340	0.43	-2.0
2,996,472	-		BWI76_RS14340	0.46	-0.8
2,996,531	+				-1.5
2,996,592	+		BWI76_RS14340	0.56	+0.8
2,996,609	+		BWI76_RS14340	0.58	-2.1
2,996,609	+		BWI76_RS14340	0.58	+1.8
2,996,816	-		BWI76_RS14340	0.76	-1.2
2,996,819	+		BWI76_RS14340	0.76	+0.3
2,996,831	+		BWI76_RS14340	0.77	-1.0
2,996,867	+		BWI76_RS14340	0.80	-0.6
2,996,882	+		BWI76_RS14340	0.82	+0.1
2,996,921	+		BWI76_RS14340	0.85	+0.5
2,997,016	+				-0.2
2,997,024	-				+0.4
2,997,104	+				+0.2
2,997,362	-				-0.0
2,997,749	+		BWI76_RS14345	0.13	-0.3
2,997,752	-		BWI76_RS14345	0.13	-0.4
2,997,754	+		BWI76_RS14345	0.13	+0.4
2,997,772	-		BWI76_RS14345	0.14	-0.1
2,997,865	+		BWI76_RS14345	0.17	-0.1
2,997,930	-		BWI76_RS14345	0.20	-0.0
2,997,992	+		BWI76_RS14345	0.22	+0.6
2,997,992	+		BWI76_RS14345	0.22	-0.2