Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS12640

Experiment: RCH2_defined_noCarbon with Mixed culture; Escherichia coli BW25113 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_noCarbon with Mixed culture; Escherichia coli BW25113 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x
2,637,249	+				-0.6
2,637,275	+				+1.0
2,637,299	-				+0.5
2,637,375	+				-2.6
2,637,375	+				+1.4
2,637,375	+				-0.4
2,637,375	+				+1.0
2,637,375	+				-0.3
2,637,375	+				+1.0
2,637,375	+				-1.6
2,637,375	+				+0.3
2,637,375	+				-0.8
2,637,375	+				-0.2
2,637,375	+				+0.6
2,637,375	+				-0.5
2,637,375	+				-0.3
2,637,375	+				-0.5
2,637,375	+				+0.7
2,637,375	+				-0.8
2,637,383	-				+1.0
2,637,383	-				-1.6
2,637,383	-				+1.9
2,637,383	-				+1.4
2,637,383	-				+1.0
2,637,383	-				-0.8
2,637,394	+				-0.2
2,637,397	-				+0.1
2,637,432	+				+0.2
2,637,471	-				+0.8
2,637,478	-				+0.4
2,637,520	-				+2.2
2,637,533	+				+0.4
2,637,589	+				+0.0
2,637,589	+				-0.6
2,637,602	+				-2.6
2,637,610	-				-0.6
2,637,613	+				+0.6
2,637,613	+				-1.0
2,637,646	+				-2.0
2,637,656	+				+0.9
2,637,717	+				-0.2
2,637,758	+				+0.1
2,637,764	+				+0.2
2,637,772	-				-0.1
2,637,772	-				+1.3
2,637,772	-				+1.2
2,637,802	+		BWI76_RS12635	0.18	-0.6
2,637,802	+		BWI76_RS12635	0.18	-1.0
2,637,802	+		BWI76_RS12635	0.18	-1.4
2,637,802	-		BWI76_RS12635	0.18	+0.2
2,637,810	+		BWI76_RS12635	0.22	+0.3
2,637,810	-		BWI76_RS12635	0.22	+0.2
2,637,810	-				+2.0
2,637,810	-		BWI76_RS12635	0.22	-0.7
2,637,813	+		BWI76_RS12635	0.24	+0.0
2,637,815	+		BWI76_RS12635	0.25	-3.1
2,637,815	+		BWI76_RS12635	0.25	+0.0
2,637,815	+		BWI76_RS12635	0.25	-0.1
2,637,815	+		BWI76_RS12635	0.25	+0.0
2,637,815	+		BWI76_RS12635	0.25	-0.1
2,637,815	+				+2.0
2,637,815	+		BWI76_RS12635	0.25	-0.2
2,637,815	+				+0.3
2,637,815	+		BWI76_RS12635	0.25	+0.4
2,637,815	+		BWI76_RS12635	0.25	-1.2
2,637,815	+				+1.0
2,637,815	+		BWI76_RS12635	0.25	+0.4
2,637,815	+				+0.0
2,637,815	+		BWI76_RS12635	0.25	-0.9
2,637,815	+		BWI76_RS12635	0.25	+0.5
2,637,815	+		BWI76_RS12635	0.25	+0.6
2,637,815	+		BWI76_RS12635	0.25	+0.0
2,637,815	+		BWI76_RS12635	0.25	+0.6
2,637,815	+		BWI76_RS12635	0.25	-2.1
2,637,815	+		BWI76_RS12635	0.25	+1.3
2,637,815	+		BWI76_RS12635	0.25	-0.3
2,637,815	+		BWI76_RS12635	0.25	+2.4
2,637,815	+		BWI76_RS12635	0.25	-1.3
2,637,823	-		BWI76_RS12635	0.29	+1.0
2,637,823	-		BWI76_RS12635	0.29	+0.0
2,637,823	-		BWI76_RS12635	0.29	+1.0
2,637,825	-		BWI76_RS12635	0.30	-1.6
2,638,023	+				+1.0
2,638,094	-				+1.0
2,638,097	+				-0.8
2,638,173	+				-0.6
2,638,214	+				+0.2
2,638,214	+				+1.0
2,638,285	-		BWI76_RS12640	0.18	-0.2
2,638,337	+		BWI76_RS12640	0.26	-0.2
2,638,344	+		BWI76_RS12640	0.27	-0.7
2,638,352	-		BWI76_RS12640	0.28	-1.3
2,638,352	-		BWI76_RS12640	0.28	-0.3
2,638,352	-		BWI76_RS12640	0.28	-0.6
2,638,401	-		BWI76_RS12640	0.36	-2.3
2,638,423	+		BWI76_RS12640	0.40	-0.9
2,638,423	+		BWI76_RS12640	0.40	-0.6
2,638,436	+		BWI76_RS12640	0.42	-1.8
2,638,450	+		BWI76_RS12640	0.44	+1.0
2,638,458	-		BWI76_RS12640	0.45	-1.1
2,638,458	-				-0.6
2,638,546	-		BWI76_RS12640	0.59	+0.4
2,638,594	-		BWI76_RS12640	0.67	-0.8
2,638,638	-		BWI76_RS12640	0.74	+0.4
2,639,007	-		BWI76_RS12645	0.14	+0.1
2,639,008	-		BWI76_RS12645	0.14	+1.0
2,639,039	+		BWI76_RS12645	0.19	+0.1
2,639,045	+		BWI76_RS12645	0.20	+0.3
2,639,050	+		BWI76_RS12645	0.21	+0.4
2,639,089	+		BWI76_RS12645	0.28	+1.0
2,639,125	+		BWI76_RS12645	0.34	-0.4
2,639,185	+		BWI76_RS12645	0.44	-0.6
2,639,244	+		BWI76_RS12645	0.54	+1.6
2,639,244	+		BWI76_RS12645	0.54	+1.2
2,639,244	+		BWI76_RS12645	0.54	+0.3
2,639,244	+		BWI76_RS12645	0.54	+0.4
2,639,244	+		BWI76_RS12645	0.54	+0.8
2,639,252	-		BWI76_RS12645	0.56	+0.1
2,639,252	-		BWI76_RS12645	0.56	-0.8
2,639,252	-		BWI76_RS12645	0.56	+1.4
2,639,252	-		BWI76_RS12645	0.56	+0.3
2,639,252	-		BWI76_RS12645	0.56	+1.2
2,639,252	-		BWI76_RS12645	0.56	-0.3
2,639,285	+		BWI76_RS12645	0.61	+0.4
2,639,290	+		BWI76_RS12645	0.62	+0.5
2,639,320	-		BWI76_RS12645	0.67	+0.2
2,639,367	+		BWI76_RS12645	0.75	-0.5
2,639,403	+		BWI76_RS12645	0.82	+0.2
2,639,403	-		BWI76_RS12645	0.82	+0.4
2,639,419	+		BWI76_RS12645	0.84	-0.2
2,639,450	+		BWI76_RS12645	0.90	+0.4
2,639,458	-				+1.0
2,639,468	+				+1.0
2,639,472	+				+1.4
2,639,480	-				+1.5
2,639,482	+				+0.8
2,639,565	+				-1.3
2,639,578	-				-2.3
2,639,598	-				-1.0
2,639,664	+				-0.6
2,639,740	+				+1.0
2,639,743	-				+1.0
2,639,745	+				-0.2
2,639,761	+				-0.2