Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS21975

Experiment: RCH2_defined_noCarbon with Mixed culture; Cupriavidus sp. AnTP704 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_noCarbon with Mixed culture; Cupriavidus sp. AnTP704 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x
4,590,698	+				-0.1
4,590,699	+				+1.2
4,590,704	+				-0.8
4,590,704	+				-0.5
4,590,704	+				-1.2
4,590,706	+				+0.8
4,590,709	+				-1.5
4,590,712	-				+0.8
4,590,712	-				-0.5
4,590,723	+				+0.0
4,590,737	-				+0.5
4,590,739	-				+0.0
4,590,739	-				+0.8
4,590,739	-				-0.0
4,590,764	+				-0.2
4,590,838	+				+0.4
4,590,838	+				-0.6
4,590,880	+				+0.3
4,590,880	+				-0.4
4,590,880	+				+0.5
4,590,896	+				-1.4
4,590,896	+				-0.8
4,590,896	+				+0.1
4,590,896	+				-0.4
4,590,898	+				-0.2
4,590,904	-				-0.2
4,590,906	-				+0.9
4,590,906	-				-1.8
4,590,919	-				+1.1
4,590,919	-				+0.4
4,590,921	+				-0.5
4,590,929	-		BWI76_RS21970	0.10	-0.0
4,590,941	-		BWI76_RS21970	0.12	-0.4
4,590,944	+		BWI76_RS21970	0.12	+0.0
4,590,952	+		BWI76_RS21970	0.13	+2.6
4,590,952	-		BWI76_RS21970	0.13	-0.4
4,590,960	+		BWI76_RS21970	0.15	+0.2
4,590,960	-		BWI76_RS21970	0.15	+0.2
4,590,960	-		BWI76_RS21970	0.15	-0.2
4,590,960	-		BWI76_RS21970	0.15	-0.8
4,590,960	-		BWI76_RS21970	0.15	-2.2
4,590,969	-		BWI76_RS21970	0.16	-1.8
4,590,976	+		BWI76_RS21970	0.17	+0.5
4,590,984	-		BWI76_RS21970	0.18	+0.4
4,590,984	-		BWI76_RS21970	0.18	-0.1
4,590,984	-		BWI76_RS21970	0.18	-0.8
4,590,984	-		BWI76_RS21970	0.18	-0.5
4,591,036	+		BWI76_RS21970	0.26	-0.7
4,591,037	+		BWI76_RS21970	0.26	-2.5
4,591,051	+		BWI76_RS21970	0.28	-1.0
4,591,059	-		BWI76_RS21970	0.30	-0.4
4,591,077	+		BWI76_RS21970	0.32	-1.8
4,591,077	+		BWI76_RS21970	0.32	+0.6
4,591,077	+		BWI76_RS21970	0.32	+0.0
4,591,080	-		BWI76_RS21970	0.33	-0.5
4,591,085	-		BWI76_RS21970	0.34	+0.4
4,591,085	-		BWI76_RS21970	0.34	+0.2
4,591,085	-		BWI76_RS21970	0.34	-0.4
4,591,085	-		BWI76_RS21970	0.34	-0.8
4,591,085	-		BWI76_RS21970	0.34	-0.5
4,591,085	-		BWI76_RS21970	0.34	-0.8
4,591,085	-		BWI76_RS21970	0.34	-0.7
4,591,088	+		BWI76_RS21970	0.34	-2.2
4,591,093	-		BWI76_RS21970	0.35	+0.0
4,591,097	-		BWI76_RS21970	0.35	-1.0
4,591,106	-		BWI76_RS21970	0.37	+0.2
4,591,107	-		BWI76_RS21970	0.37	+0.2
4,591,116	-		BWI76_RS21970	0.38	-1.3
4,591,164	-		BWI76_RS21970	0.46	-0.8
4,591,189	+		BWI76_RS21970	0.49	-1.7
4,591,206	-		BWI76_RS21970	0.52	-2.2
4,591,235	+		BWI76_RS21970	0.56	-0.2
4,591,269	+		BWI76_RS21970	0.62	-0.8
4,591,269	+		BWI76_RS21970	0.62	+0.8
4,591,269	+		BWI76_RS21970	0.62	+0.1
4,591,271	+		BWI76_RS21970	0.62	-0.3
4,591,277	-		BWI76_RS21970	0.63	-0.1
4,591,277	-		BWI76_RS21970	0.63	+1.8
4,591,277	-		BWI76_RS21970	0.63	-0.4
4,591,277	-		BWI76_RS21970	0.63	+0.1
4,591,277	-		BWI76_RS21970	0.63	-1.8
4,591,277	-		BWI76_RS21970	0.63	-1.5
4,591,279	+		BWI76_RS21970	0.63	+0.1
4,591,279	+		BWI76_RS21970	0.63	-0.2
4,591,279	+		BWI76_RS21970	0.63	-0.6
4,591,279	+		BWI76_RS21970	0.63	-0.6
4,591,279	+		BWI76_RS21970	0.63	-0.5
4,591,279	+		BWI76_RS21970	0.63	-0.6
4,591,287	-		BWI76_RS21970	0.64	-0.1
4,591,287	-		BWI76_RS21970	0.64	-1.3
4,591,287	-		BWI76_RS21970	0.64	-1.5
4,591,287	-		BWI76_RS21970	0.64	-2.8
4,591,287	-		BWI76_RS21970	0.64	-0.2
4,591,287	-		BWI76_RS21970	0.64	-0.2
4,591,287	-		BWI76_RS21970	0.64	-0.2
4,591,287	-		BWI76_RS21970	0.64	-3.2
4,591,287	-		BWI76_RS21970	0.64	+0.8
4,591,287	-		BWI76_RS21970	0.64	-1.8
4,591,349	+		BWI76_RS21970	0.74	-2.2
4,591,372	+		BWI76_RS21970	0.77	+1.0
4,591,376	+		BWI76_RS21970	0.78	-0.5
4,591,394	-		BWI76_RS21970	0.80	+0.1
4,591,394	-		BWI76_RS21970	0.80	+0.8
4,591,451	+		BWI76_RS21970	0.89	-2.7
4,591,457	-				-0.9
4,591,461	+				+0.4
4,591,461	+				-1.9
4,591,461	+				+0.4
4,591,469	-				-0.5
4,591,469	-				+0.4
4,591,469	-				-0.2
4,591,469	-				-1.2
4,591,479	-				-2.6
4,591,479	-				-0.2
4,591,487	-				+0.8
4,591,497	-				-0.2
4,591,504	-				+0.8
4,591,562	+				+0.7
4,591,562	+				+0.6
4,591,562	+				+0.0
4,591,562	+				-2.3
4,591,562	+				-0.1
4,591,602	+				+0.4
4,591,611	-				-1.8
4,591,618	-				+0.8
4,591,626	+				+1.1
4,591,636	-				-0.9
4,591,638	+				-0.6
4,591,643	-				-0.6
4,591,653	-				+0.8
4,591,659	-				+0.8
4,591,661	+				+0.6
4,591,661	+				-1.2
4,591,669	-				-1.8
4,591,675	+				+0.4
4,591,693	-				-0.6
4,591,697	+				+0.1
4,591,702	+				+0.8
4,591,705	-				-0.6
4,591,705	-				+0.5
4,591,705	-				-0.9
4,591,710	-				+1.8
4,591,732	+		BWI76_RS21975	0.10	-0.6
4,591,732	+		BWI76_RS21975	0.10	-0.2
4,591,732	+		BWI76_RS21975	0.10	-1.5
4,591,732	+		BWI76_RS21975	0.10	-0.3
4,591,732	+		BWI76_RS21975	0.10	-1.5
4,591,732	+		BWI76_RS21975	0.10	-0.1
4,591,732	+		BWI76_RS21975	0.10	+0.8
4,591,740	-		BWI76_RS21975	0.11	+0.3
4,591,740	-		BWI76_RS21975	0.11	-0.3
4,591,740	-		BWI76_RS21975	0.11	+0.1
4,591,740	-		BWI76_RS21975	0.11	-0.4
4,591,740	-		BWI76_RS21975	0.11	+0.2
4,591,740	-		BWI76_RS21975	0.11	-1.5
4,591,740	-		BWI76_RS21975	0.11	+0.2
4,591,740	-		BWI76_RS21975	0.11	+0.5
4,591,830	+		BWI76_RS21975	0.26	-0.8
4,591,847	-				+0.8
4,591,863	+		BWI76_RS21975	0.32	+2.8
4,591,863	+		BWI76_RS21975	0.32	+0.3
4,591,863	+		BWI76_RS21975	0.32	+1.0
4,591,863	+		BWI76_RS21975	0.32	+0.2
4,591,864	+		BWI76_RS21975	0.32	-1.1
4,591,871	-		BWI76_RS21975	0.33	-1.5
4,591,931	+		BWI76_RS21975	0.43	-0.2
4,591,931	+		BWI76_RS21975	0.43	-2.0
4,591,931	+				-0.2
4,591,931	+		BWI76_RS21975	0.43	-0.8
4,591,931	+		BWI76_RS21975	0.43	+0.1
4,591,939	-		BWI76_RS21975	0.45	-2.2
4,591,939	-		BWI76_RS21975	0.45	-0.7
4,591,939	-		BWI76_RS21975	0.45	+2.4
4,591,939	-		BWI76_RS21975	0.45	-1.9
4,591,939	-		BWI76_RS21975	0.45	-0.2
4,591,939	-		BWI76_RS21975	0.45	+0.8
4,591,939	-		BWI76_RS21975	0.45	-0.4
4,591,941	+		BWI76_RS21975	0.45	+0.2
4,591,949	-		BWI76_RS21975	0.46	-1.8
4,591,949	-		BWI76_RS21975	0.46	-0.5
4,591,949	-		BWI76_RS21975	0.46	-2.0
4,591,949	-		BWI76_RS21975	0.46	-0.5
4,591,949	-		BWI76_RS21975	0.46	+0.4
4,591,949	-		BWI76_RS21975	0.46	+0.2
4,591,961	-		BWI76_RS21975	0.48	-2.6
4,591,972	+		BWI76_RS21975	0.50	-1.2
4,592,005	-		BWI76_RS21975	0.56	+0.8
4,592,015	-		BWI76_RS21975	0.57	-0.8
4,592,042	+		BWI76_RS21975	0.62	-0.5
4,592,132	+		BWI76_RS21975	0.77	-0.8
4,592,132	+		BWI76_RS21975	0.77	-0.2
4,592,132	+		BWI76_RS21975	0.77	+0.1
4,592,136	+		BWI76_RS21975	0.78	-0.4
4,592,136	+		BWI76_RS21975	0.78	-1.5
4,592,142	+		BWI76_RS21975	0.79	+0.8
4,592,151	+		BWI76_RS21975	0.80	+1.5
4,592,170	+		BWI76_RS21975	0.83	-0.5
4,592,172	-				-0.8
4,592,175	+		BWI76_RS21975	0.84	+1.5
4,592,175	+		BWI76_RS21975	0.84	-1.1
4,592,175	+		BWI76_RS21975	0.84	+0.1
4,592,175	+		BWI76_RS21975	0.84	-0.8
4,592,175	+		BWI76_RS21975	0.84	-1.0
4,592,175	+		BWI76_RS21975	0.84	-1.1
4,592,175	+		BWI76_RS21975	0.84	-0.4
4,592,175	+		BWI76_RS21975	0.84	-3.1
4,592,175	+		BWI76_RS21975	0.84	+0.5
4,592,175	+		BWI76_RS21975	0.84	-0.9
4,592,175	+		BWI76_RS21975	0.84	-0.2
4,592,190	+		BWI76_RS21975	0.87	+1.8
4,592,190	+		BWI76_RS21975	0.87	-0.2
4,592,190	+		BWI76_RS21975	0.87	-1.2
4,592,190	+		BWI76_RS21975	0.87	-0.8
4,592,190	+		BWI76_RS21975	0.87	+0.4
4,592,190	+		BWI76_RS21975	0.87	-0.8
4,592,190	+		BWI76_RS21975	0.87	-1.2
4,592,190	+		BWI76_RS21975	0.87	+0.8
4,592,190	+		BWI76_RS21975	0.87	-0.2
4,592,193	-		BWI76_RS21975	0.87	+0.5
4,592,198	+		BWI76_RS21975	0.88	+0.8
4,592,198	+				+0.8
4,592,198	-		BWI76_RS21975	0.88	-0.9
4,592,198	-		BWI76_RS21975	0.88	-2.1
4,592,198	-		BWI76_RS21975	0.88	-1.1
4,592,198	-		BWI76_RS21975	0.88	+0.8
4,592,198	-		BWI76_RS21975	0.88	+0.8
4,592,198	-		BWI76_RS21975	0.88	+0.4
4,592,198	-				-0.2
4,592,198	-		BWI76_RS21975	0.88	-0.5
4,592,198	-		BWI76_RS21975	0.88	-1.4
4,592,203	+		BWI76_RS21975	0.89	-1.8
4,592,203	+		BWI76_RS21975	0.89	-0.8
4,592,203	+				+0.0
4,592,206	-		BWI76_RS21975	0.89	+0.1
4,592,211	-				+0.2
4,592,211	-				-3.3
4,592,211	-				-1.1
4,592,211	-				-2.2
4,592,211	-				+2.1
4,592,211	-				-1.6
4,592,211	-				-2.5
4,592,211	-				+0.2
4,592,215	+				+0.1
4,592,215	+				+2.4
4,592,216	+				-1.5
4,592,221	+				+0.8
4,592,229	-				-1.5
4,592,231	-				+0.5
4,592,231	-				-1.5
4,592,231	-				+0.4
4,592,231	-				+0.0
4,592,231	-				+0.2
4,592,231	-				-0.4
4,592,310	-				-0.1
4,592,315	+				-0.4
4,592,315	+				-1.5
4,592,315	+				-0.2
4,592,315	+				+1.1
4,592,315	+				+0.8
4,592,315	+				-0.1
4,592,315	+				-2.0
4,592,315	+				+0.1
4,592,315	+				+1.4
4,592,315	+				+1.2
4,592,315	+				+1.1
4,592,315	+				+1.0
4,592,315	+				-0.2
4,592,315	+				+0.5
4,592,315	+				-0.5
4,592,315	+				-0.5
4,592,315	+				-1.2
4,592,315	+				+0.6
4,592,315	+				+0.3
4,592,315	+				+2.4
4,592,315	+				+1.2
4,592,315	+				-0.2
4,592,315	+				-0.7
4,592,315	+				-0.8
4,592,315	+				-0.2
4,592,315	+				+0.1
4,592,315	+				-0.2
4,592,315	+				+0.8
4,592,315	+				+0.7
4,592,315	+				-1.2
4,592,315	+				-0.2
4,592,315	+				+0.8
4,592,315	+				+0.8
4,592,315	+				-0.6
4,592,315	+				+0.8
4,592,315	+				-0.8
4,592,315	+				-0.2
4,592,315	+				-0.3
4,592,315	+				-0.7
4,592,315	+				-1.3
4,592,315	+				+0.8
4,592,315	+				+1.8
4,592,315	+				-0.2
4,592,315	+				-0.8
4,592,315	+				-1.0
4,592,315	+				-0.2
4,592,315	+				-1.6
4,592,315	+				-1.4
4,592,315	+				+1.0
4,592,315	+				-1.5
4,592,315	+				-2.9
4,592,315	+				+0.8
4,592,315	+				-0.6
4,592,315	+				-0.8
4,592,315	+				-0.8
4,592,315	+				-2.3
4,592,315	+				-1.2
4,592,315	+				-2.3
4,592,315	+				+0.2
4,592,315	+				+0.5
4,592,315	+				+0.7
4,592,315	+				+0.0
4,592,315	+				-0.9
4,592,315	+				-0.8
4,592,315	+				-0.8
4,592,315	+				-1.2
4,592,315	+				-0.5
4,592,315	+				+2.4
4,592,315	+				-0.2
4,592,315	+				-0.8
4,592,315	+				+0.8
4,592,316	+				-0.5
4,592,316	+				-0.2
4,592,316	+				+2.4
4,592,316	+				+0.9
4,592,323	-				-0.6
4,592,323	-				+0.8
4,592,323	-				-2.8
4,592,323	-				+0.3
4,592,323	-				+1.8
4,592,323	-				+1.0
4,592,323	-				-1.2
4,592,323	-				+0.3
4,592,323	-				-1.3
4,592,323	-				+0.2
4,592,323	-				+0.7
4,592,323	-				-1.9
4,592,323	-				-0.8
4,592,323	-				+0.1
4,592,323	-				-2.1
4,592,323	-				-2.2
4,592,323	-				-1.4
4,592,323	-				-1.0
4,592,323	-				+3.0
4,592,323	-				+0.8
4,592,323	-				-0.9
4,592,323	-				+0.2
4,592,323	-				-0.5
4,592,323	-				-0.1
4,592,323	-				-0.2
4,592,323	-				+0.4
4,592,323	-				+0.8
4,592,323	-				-0.2
4,592,323	-				+0.7
4,592,323	-				+0.2
4,592,323	-				-1.5
4,592,323	-				+0.8
4,592,323	-				-2.5
4,592,323	-				-1.8
4,592,323	-				-0.7
4,592,323	-				+0.2
4,592,323	-				-3.3
4,592,323	-				-1.0
4,592,323	-				-0.8
4,592,323	-				-1.0
4,592,323	-				-0.3
4,592,323	-				+0.1
4,592,323	-				-1.8
4,592,323	-				-0.8
4,592,323	-				+0.1
4,592,323	-				-0.8
4,592,323	-				-0.2
4,592,323	-				+0.6
4,592,323	-				-1.2
4,592,323	-				-0.9
4,592,323	-				-0.2
4,592,323	-				-0.0
4,592,323	-				-0.8
4,592,323	-				+0.4
4,592,323	-				-0.9
4,592,323	-				+0.8
4,592,323	-				-2.0
4,592,323	-				+0.8
4,592,323	-				+0.8
4,592,323	-				-0.6
4,592,323	-				-0.2
4,592,323	-				+0.5
4,592,323	-				-0.4
4,592,323	-				-0.7
4,592,323	-				-0.6
4,592,323	-				-0.5
4,592,323	-				-0.2
4,592,323	-				-1.5
4,592,323	-				+0.8
4,592,323	-				-0.3
4,592,323	-				+1.1
4,592,323	-				-0.6
4,592,323	-				+0.8
4,592,323	-				+0.4
4,592,323	-				-0.3
4,592,323	-				-0.4
4,592,323	-				+0.5
4,592,323	-				+0.2
4,592,323	-				+0.8
4,592,323	-				+0.3
4,592,323	-				-0.8
4,592,323	-				-2.0
4,592,323	-				-0.0
4,592,323	-				-0.7
4,592,323	-				-0.2
4,592,323	-				-3.2
4,592,323	-				-3.4
4,592,323	-				+0.5
4,592,323	-				-2.9
4,592,323	-				-0.8
4,592,323	-				-0.5
4,592,323	-				+0.6
4,592,323	-				-2.0
4,592,323	-				-0.5
4,592,323	-				+0.4
4,592,323	-				-1.4
4,592,323	-				-0.6
4,592,323	-				-0.6
4,592,323	-				-1.1
4,592,323	-				-0.2
4,592,323	-				-0.2
4,592,323	-				-0.7
4,592,323	-				-1.2
4,592,323	-				-2.2
4,592,323	-				-1.3
4,592,323	-				+0.1
4,592,323	-				-0.2
4,592,323	-				+0.7
4,592,323	-				-0.9
4,592,323	-				+1.0
4,592,323	-				-0.2
4,592,323	-				-0.7
4,592,323	-				-1.2
4,592,323	-				-1.5
4,592,323	-				+0.7
4,592,323	-				+2.5
4,592,323	-				+1.8
4,592,323	-				-0.9
4,592,323	-				+0.8
4,592,323	-				-1.2
4,592,323	-				-0.8
4,592,323	-				-1.5
4,592,323	-				+1.0
4,592,324	-				-2.0
4,592,324	-				+0.8
4,592,324	-				-1.5
4,592,324	-				-1.3
4,592,324	-				-0.2
4,592,324	-				+0.6
4,592,327	+				-0.2
4,592,327	+				-0.2
4,592,327	+				-1.0
4,592,327	+				+0.5
4,592,327	+				-0.8
4,592,327	+				-1.0
4,592,327	+				-0.4
4,592,335	-				-0.2
4,592,335	-				-2.6
4,592,335	-				-1.2
4,592,335	-				+0.8
4,592,335	-				-0.3
4,592,335	-				-0.3
4,592,335	-				-0.4
4,592,335	-				-0.8
4,592,335	-				-1.2
4,592,335	-				-0.5
4,592,335	-				-0.9
4,592,335	-				-0.2
4,592,335	-				+0.5
4,592,335	-				+1.0
4,592,335	-				-0.1
4,592,335	-				+1.8
4,592,335	-				+0.1
4,592,335	-				-1.9
4,592,335	-				-0.2
4,592,335	-				+0.8
4,592,335	-				-0.6
4,592,335	-				-0.2
4,592,335	-				+0.8
4,592,335	-				-1.6
4,592,335	-				-1.3
4,592,335	-				+0.5
4,592,337	+				-0.1
4,592,345	-				-1.7
4,592,368	+				+0.8
4,592,381	+		BWI76_RS21980	0.18	+1.2
4,592,381	+		BWI76_RS21980	0.18	+0.8
4,592,382	-		BWI76_RS21980	0.19	+0.8
4,592,389	-		BWI76_RS21980	0.22	+1.1
4,592,389	-		BWI76_RS21980	0.22	-1.5
4,592,389	-		BWI76_RS21980	0.22	+0.8
4,592,389	-		BWI76_RS21980	0.22	+0.8
4,592,389	-		BWI76_RS21980	0.22	-1.3
4,592,631	+				-0.5
4,592,641	+				+0.0
4,592,641	+				+0.4
4,592,641	+				-2.0
4,592,649	-				-1.8
4,592,694	-				+2.2
4,592,724	+				+0.3
4,592,750	+				-0.4
4,592,815	+				+0.5
4,592,890	+				-0.1
4,592,936	+				+0.1
4,592,941	+				-0.8
4,592,941	+				+0.6
4,592,941	+				+0.5
4,592,941	+				-0.8
4,592,944	-				+0.2
4,592,944	-				-2.5
4,592,944	-				+0.6
4,592,944	-				+0.2
4,592,944	-				+0.6
4,592,944	-				+0.1
4,592,949	-				-0.2
4,592,949	-				+2.4
4,592,955	+				+0.2
4,592,970	-				+0.7
4,593,040	-				+0.2
4,593,042	+				+0.6
4,593,079	-				+0.1
4,593,079	-				-0.2
4,593,116	-		BWI76_RS21985	0.12	-1.5
4,593,170	+		BWI76_RS21985	0.15	+0.1
4,593,191	+		BWI76_RS21985	0.17	-0.1
4,593,199	-		BWI76_RS21985	0.17	+0.4
4,593,199	-		BWI76_RS21985	0.17	+2.0
4,593,204	-		BWI76_RS21985	0.17	+0.2